RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 GABBR2O75899 941 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 T-ENOLP0DO92 83 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 ALDH3A1P30838 453 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 PTPN7P35236 360 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 ELK3P41970 407 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 ROR1Q01973 937 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 LDLRAD1Q5T700 205 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 RFWD3Q6PCD5 774 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 LCLAT1Q6UWP7 414 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 TTC13Q8NBP0 860 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 RFWD2Q8NHY2 731 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 NPLOC4Q8TAT6 608 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 ZNF75CPQ92670 426 aaPredicted RBP13.67□□□□□ -0.22
CTNS-201ENST00000046640 TTC25Q96NG3 672 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 KATNBL1Q9H079 304 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 RNF39Q9H2S5 420 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 VTA1Q9NP79 307 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 RAB6BQ9NRW1 208 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 ZFP69BQ9UJL9 534 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 PPP1R12AO14974 1030 aaPredicted RBP13.66□□□□□ -0.22
CTNS-201ENST00000046640 RBL1P28749 1068 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 GABRB2P47870 512 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 RABGGTBP53611 331 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 SLC8A3P57103 927 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 YWHAGP61981 247 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTNS-201ENST00000046640 ACVR2BQ13705 512 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 CAPRIN2Q6IMN6 1127 aaKnown RBP13.66□□□□□ -0.22
CTNS-201ENST00000046640 PDIK1LQ8N165 341 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 DNAJB3Q8WWF6 145 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 GRAMD1AQ96CP6 724 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 FAF2Q96CS3 445 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 NAF1Q96HR8 494 aaKnown RBP13.66□□□□□ -0.22
CTNS-201ENST00000046640 MAML3Q96JK9 1138 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 MS4A4AQ96JQ5 239 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 PAFAH2Q99487 392 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 RSAD1Q9HA92 442 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 SLC17A7Q9P2U7 560 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 STARD13Q9Y3M8 1113 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 PAPSS1O43252 624 aaPredicted RBP13.66□□□□□ -0.22
CTNS-201ENST00000046640 EDF1O60869 148 aaKnown RBP13.66□□□□□ -0.22
CTNS-201ENST00000046640 ABHD2P08910 425 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 IGFBP6P24592 240 aaPredicted RBP13.66□□□□□ -0.22
CTNS-201ENST00000046640 PLEKHG4Q58EX7 1191 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 NLRP9Q7RTR0 991 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 MAB21L3Q8N8X9 362 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 SHCBP1Q8NEM2 672 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 DENND1AQ8TEH3 1009 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 CFAP36Q96G28 342 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 PRR11Q96HE9 360 aaPredicted RBP13.66□□□□□ -0.22
CTNS-201ENST00000046640 C2CD2Q9Y426 696 aa13.66□□□□□ -0.22
CTNS-201ENST00000046640 PEX11AO75192 247 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 FAM155BO75949 473 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 IL4RP24394 825 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 SDC4P31431 198 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 GEMIN4P57678 1058 aaKnown RBP13.65□□□□□ -0.22
CTNS-201ENST00000046640 HIC1Q14526 733 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 DGKDQ16760 1214 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 LRRC6Q86X45 466 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 CCDC110Q8TBZ0 833 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 TMEM40Q8WWA1 233 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 SLC7A6OSQ96CW6 309 aaPredicted RBP13.65□□□□□ -0.22
CTNS-201ENST00000046640 OSBPL1AQ9BXW6 950 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 FOXP3Q9BZS1 431 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 GBA2Q9HCG7 927 aaPredicted RBP13.65□□□□□ -0.22
CTNS-201ENST00000046640 HESX1Q9UBX0 185 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 PIN4Q9Y237 131 aaKnown RBP13.65□□□□□ -0.22
CTNS-201ENST00000046640 RECQL4O94761 1208 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 BCAR1P56945 870 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 INCA1Q0VD86 236 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 PDK4Q16654 411 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 SOWAHAQ2M3V2 549 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 APBB1IPQ7Z5R6 666 aaPredicted RBP13.65□□□□□ -0.22
CTNS-201ENST00000046640 PLD5Q8N7P1 536 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 TCP10LQ8TDR4 215 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 RNF157Q96PX1 679 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 TINF2Q9BSI4 451 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 SNRNP25Q9BV90 132 aaKnown RBP13.65□□□□□ -0.22
CTNS-201ENST00000046640 DENND2DQ9H6A0 471 aaPredicted RBP13.65□□□□□ -0.22
CTNS-201ENST00000046640 PIH1D1Q9NWS0 290 aaKnown RBP13.65□□□□□ -0.22
CTNS-201ENST00000046640 PSMC3IPQ9P2W1 217 aaPredicted RBP13.65□□□□□ -0.22
CTNS-201ENST00000046640 CPA4Q9UI42 421 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 KBTBD13C9JR72 458 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 APRTP07741 180 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 CYP2C9P11712 490 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 YY1P25490 414 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 GRM5P41594 1212 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 BEX3Q00994 111 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 DUSP28Q4G0W2 176 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 OLFML1Q6UWY5 402 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 PCGF5Q86SE9 256 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 ATP11CQ8NB49 1132 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 PCDH19Q8TAB3 1148 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 DTX3LQ8TDB6 740 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 C10orf82Q8WW14 230 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 KHSRPQ92945 711 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTNS-201ENST00000046640 DHX35Q9H5Z1 703 aaKnown RBP13.65□□□□□ -0.22
CTNS-201ENST00000046640 RNPEPL1Q9HAU8 725 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 FBXO6Q9NRD1 293 aaPredicted RBP13.65□□□□□ -0.22
CTNS-201ENST00000046640 TMPRSS4Q9NRS4 437 aa13.65□□□□□ -0.22
CTNS-201ENST00000046640 MFHAS1Q9Y4C4 1052 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms