RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Reps2Q80XA6 521 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 LppQ8BFW7 613 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 AgpsQ8C0I1 645 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Zfp446Q8C9M8 523 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 OlahQ8R197 265 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Lrrc42Q8R2U7 421 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pcdhb2Q91Y00 799 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pcdha5Q91Y15 934 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Cpt1bQ924X2 772 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Chordc1Q9D1P4 331 aaKnown RBP13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Asah2Q9JHE3 756 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Adrm1Q9JKV1 407 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Clcn2Q9R0A1 908 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gabbr1Q9WV18 960 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Lactbl1S4R213 581 aa13.86□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Dennd5bA2RSQ0 1274 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 2010300C02RikE9Q3M9 1175 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Cyp4f40G3UW81 524 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Abhd12bG3UZN6 359 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Serpinb6eI7HJI3 429 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Akap1O08715 857 aaKnown RBP13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Mup5P11591 180 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Kcnj6P48542 425 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Psmc4P54775 418 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 FaxcQ3UMF9 409 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Ccdc110Q3V125 848 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 SkiQ60698 725 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Zfp90Q61967 636 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Ip6k2Q80V72 448 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Q810S2 196 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pnma2Q8BHK0 365 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Fbxw7Q8VBV4 629 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Olfr30Q8VGD8 315 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Zfp64Q99KE8 643 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pard3bQ9CSB4 1203 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Mrps22Q9CXW2 359 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Syap1Q9D5V6 365 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Abcg8Q9DBM0 673 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 XkQ9QXY7 446 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 QkiQ9QYS9 341 aaKnown RBP13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Clec4aQ9QZ15 238 aa13.85□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gm29554A0A087WNW4 188 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Daw1D3Z7A5 415 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gm10722F6VLK5 217 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Mroh4G3X8W1 983 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pim1P06803 397 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Dynlt1P51807 113 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Rab6bP61294 208 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Cdk16Q04735 496 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Zbtb48Q1H9T6 681 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Spag6Q3V0U9 509 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Mxd4Q60948 209 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 CochQ62507 552 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pde10aQ8CA95 790 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Calcoco1Q8CGU1 691 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Champ1Q8K327 802 aaKnown RBP13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Ccdc65Q8VHI7 493 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Synpo2Q91YE8 1087 aaKnown RBP13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Atp6v1e2Q9D593 226 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Strn3Q9ERG2 796 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Ccnyl1D3YUJ3 367 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gm10720D3Z1I5 223 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gm10719E9Q7T3 227 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gm3424L7N298 263 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gm8246M0QWX9 263 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Tnfrsf11bO08712 401 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Eftud2O08810 971 aaKnown RBP13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Rdh7O88451 316 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Ap2a2P17427 938 aaKnown RBP13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Art2aP17981 287 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Mmp13P33435 472 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 BtkP35991 659 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Pms2P54279 859 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Arl4aP61213 200 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 YwhazP63101 245 aaKnown RBP13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Ano7Q14AT5 859 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Mif4gdQ3UBZ5 222 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Tmem237Q3V0J1 427 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Acbd5Q5XG73 508 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Myo6Q64331 1265 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gpsm1Q6IR34 673 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Cd300lfQ6SJQ7 337 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Zdhhc19Q810M5 347 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Lrrc14Q8VC16 493 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Hip1Q8VD75 1029 aaKnown RBP13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Usp3Q91W36 520 aaKnown RBP13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Sdcbp2Q99JZ0 292 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Thg1lQ9CY52 298 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 ParvbQ9ES46 365 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Egfl7Q9QXT5 275 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Bmp15Q9Z0L4 392 aa13.84□□□□□ -0.19
Pdlim5-208ENSMUST00000196220 Gm45837F7D3W5 961 aa13.83□□□□□ -0.2
Pdlim5-208ENSMUST00000196220 Rpl21O09167 160 aaKnown RBP13.83□□□□□ -0.2
Pdlim5-208ENSMUST00000196220 Sstr1P30873 391 aa13.83□□□□□ -0.2
Pdlim5-208ENSMUST00000196220 Dpep1P31428 410 aa13.83□□□□□ -0.2
Pdlim5-208ENSMUST00000196220 Elk3P41971 409 aa13.83□□□□□ -0.2
Pdlim5-208ENSMUST00000196220 Emilin3P59900 758 aa13.83□□□□□ -0.2
Pdlim5-208ENSMUST00000196220 Rbm20Q3UQS8 1199 aaKnown RBP13.83□□□□□ -0.2
Pdlim5-208ENSMUST00000196220 Hif1aQ61221 836 aaKnown RBP13.83□□□□□ -0.2
Pdlim5-208ENSMUST00000196220 Olfr1105Q7TR58 312 aa13.83□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms