RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Fam160b1Q8CDM8 764 aa16.16■□□□□ 0.18
Vcan-201ENSMUST00000109543 Tdrd7Q8K1H1 1086 aaKnown RBP16.16■□□□□ 0.18
Vcan-201ENSMUST00000109543 Prpf39Q8K2Z2 665 aa16.16■□□□□ 0.18
Vcan-201ENSMUST00000109543 Kdm8Q9CXT6 414 aa16.16■□□□□ 0.18
Vcan-201ENSMUST00000109543 Tssk3Q9D2E1 268 aa16.16■□□□□ 0.18
Vcan-201ENSMUST00000109543 Terb2Q9D494 218 aa16.16■□□□□ 0.18
Vcan-201ENSMUST00000109543 Atg7Q9D906 698 aa16.16■□□□□ 0.18
Vcan-201ENSMUST00000109543 Ccdc103Q9D9P2 237 aa16.16■□□□□ 0.18
Vcan-201ENSMUST00000109543 Hes6Q9JHE6 224 aa16.16■□□□□ 0.18
Vcan-201ENSMUST00000109543 Msgn1Q9JK54 188 aa16.16■□□□□ 0.18
Vcan-201ENSMUST00000109543 Mbtps1Q9WTZ2 1052 aa16.16■□□□□ 0.18
Vcan-201ENSMUST00000109543 Tmem131O70472 1877 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Gm29554A0A087WNW4 188 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Gm10720D3Z1I5 223 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 OgdhlE9Q7L0 1029 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Snx3O70492 162 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Srpk1O70551 648 aaKnown RBP16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 LgmnO89017 435 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Myl2P51667 166 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Npas2P97460 816 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Alkbh5Q3TSG4 395 aaKnown RBP16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 MregQ6NVG5 214 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 GnsQ8BFR4 544 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Rab44Q8CB87 725 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Pnpt1Q8K1R3 783 aaKnown RBP16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Itgbl1Q8VDV0 494 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Mrps22Q9CXW2 359 aa16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Ssu72Q9CY97 194 aaKnown RBP16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 GarsQ9CZD3 729 aaKnown RBP16.15■□□□□ 0.18
Vcan-201ENSMUST00000109543 Zfp236S4R299 1847 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Gm44511A0A0N4SW10 223 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Lrriq4A6H6A4 596 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Gm281D3Z1Y0 860 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Gm10719E9Q7T3 227 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Cacna2d1O08532 1103 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 TnfP06804 235 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Klrb1bP27812 223 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 EnahQ03173 802 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Slc9b2Q5BKR2 547 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 RilpQ5ND29 369 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Q5XFZ0 217 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 PostnQ62009 838 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Rad54bQ6PFE3 886 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Ip6k2Q80V72 448 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Ankrd52Q8BTI7 1076 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 CenpuQ8C4M7 410 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Rftn2Q8CHX7 500 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Tasp1Q8R1G1 420 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Rpa1Q8VEE4 623 aaKnown RBP16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Gps1Q99LD4 471 aaKnown RBP16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Cpxm1Q9Z100 722 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Gm5538W4VSP6 401 aa16.14■□□□□ 0.18
Vcan-201ENSMUST00000109543 Serpina3iD3Z450 408 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Gm6583E9Q8Z1 469 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Atf6F6VAN0 656 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Rgsl1H3BL40 1073 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Pim1P06803 397 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Pcbp1P60335 356 aaKnown RBP16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Orc2Q60862 576 aaKnown RBP16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Aldh1a2Q62148 518 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Spata24Q6P926 205 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Cand1Q6ZQ38 1230 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 SrlQ7TQ48 910 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Got1l1Q7TSV6 404 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Arhgef33Q8BW86 850 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Snap47Q8R570 413 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Gdap2Q9DBL2 498 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 AuhQ9JLZ3 314 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Znhit2Q9QY66 399 aa16.14■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ptchd4B9EKX1 904 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 C87414E9PWI7 475 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Akap1O08715 857 aaKnown RBP16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Psen1P49769 467 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 InhbaQ04998 424 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 CblbQ3TTA7 982 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 CcnjlQ5SRT8 387 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Znf235Q61116 645 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Olfr1105Q7TR58 312 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Ankrd45Q810N6 248 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Znf879Q8BI99 563 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Rfx6Q8C7R7 927 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Olfr356Q8VFP5 315 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Hkdc1Q91W97 915 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Tas1r2Q925I4 843 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Egfl7Q9QXT5 275 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Tnni1Q9WUZ5 187 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Celf2Q9Z0H4 508 aaKnown RBP16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Gm4756A0A140LIS8 335 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Zfp612A0A1D5RMC2 672 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Slc16a6B1AT66 607 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Tnfrsf11bO08712 401 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Cyp27b1O35084 507 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 ChkaO54804 453 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Usp10P52479 792 aaKnown RBP16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 GckP52792 465 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Pdcd1Q02242 288 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Cdk16Q04735 496 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Stt3bQ3TDQ1 823 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 CochQ62507 552 aa16.13■□□□□ 0.17
Vcan-201ENSMUST00000109543 Npdc1Q64322 332 aa16.13■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms