RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Gm36028A0A0U1RPM1 299 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Gm13089A2AGW7 455 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Tmem235B1AQL3 211 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Vmn1r88E9Q235 316 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Zbtb11G5E8B9 1050 aaKnown RBP12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Dpysl4O35098 572 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Acot1O55137 419 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 ChadO55226 358 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 DtnbO70585 659 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Rrm1P07742 792 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Hsp90aa1P07901 733 aaKnown RBP12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 C4bpaP08607 469 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 JundP15066 341 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Adrb1P34971 466 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 HpdP49429 393 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Foxp2P58463 714 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Itga11P61622 1188 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Rad54lP70270 747 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 IdsQ08890 552 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Q3TTJ4 293 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Zfp51Q3U4L8 781 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ceacam5Q3UKK2 947 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Nr2c1Q505F1 590 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 FancbQ5XJY6 703 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 TCAIMQ66JZ4 499 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ggnbp1Q6K1E7 370 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Retreg2Q6NS82 541 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Adat2Q6P6J0 191 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Tlr13Q6R5N8 991 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Clec2eQ80XD9 204 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Efcab14Q8BGQ6 484 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Sit1Q8C503 180 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Kctd2Q8CEZ0 266 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 PdxkQ8K183 312 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Vps36Q91XD6 386 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 SardhQ99LB7 919 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ola1Q9CZ30 396 aaKnown RBP12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Chordc1Q9D1P4 331 aaKnown RBP12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Fam187aQ9D3R5 417 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Eef1gQ9D8N0 437 aaKnown RBP12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Sgf29Q9DA08 293 aaKnown RBP12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Copb1Q9JIF7 953 aa12.73□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 OtofQ9ESF1 1997 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cacna1bO55017 2327 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Il17dA0A0B4J1G4 205 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Gm1993A6X8I0 212 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Zfp990B1AVN5 605 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Nxpe3B9EKK6 559 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Trim30cD3YVI9 513 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 SlxD3Z347 212 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Spata31E9QAF0 1014 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Vmn1r176G3UW31 304 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Gm3415J3QMS8 315 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 AlyrefO08583 255 aaKnown RBP12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Nr1i3O35627 358 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ring1O35730 406 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Sypl2O89104 264 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Kif4P33174 1231 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cnr2P47936 347 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 YwhagP61982 247 aaKnown RBP12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Gabrb2P63137 512 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Rmdn3Q3UJU9 470 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ccdc110Q3V125 848 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Nxpe4Q52KP5 543 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 MlipQ5FW52 269 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Foxl1Q64731 336 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Krt39Q6IFX4 482 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Polr3gQ6NXY9 223 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Hmgb4Q6P8W9 181 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Zfyve28Q6ZPK7 905 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Zfp397Q7TNK4 527 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Tbx10Q810F8 385 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Thop1Q8C1A5 687 aaKnown RBP12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cstf2tQ8C7E9 632 aaKnown RBP12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Gtf3c1Q8K284 2101 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Dhcr24Q8VCH6 516 aaKnown RBP12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Pcdhb17Q91VD8 799 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Lztr1Q9CQ33 837 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Mageb16Q9CWV4 363 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Med7Q9CZB6 233 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Gm3404Q9D506 307 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 MesdQ9ERE7 224 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Lmx1aQ9JKU8 382 aa12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Orc1Q9Z1N2 840 aaKnown RBP12.72□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Wdfy4E9Q2M9 3149 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 MgaA2AWL7 3003 aaKnown RBP12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Igkv10-95A0A0G2JFY3 115 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ccdc149F6V035 524 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Gm5814J3QP80 125 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Hmx1O70218 332 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Mybpc3O70468 1270 aaKnown RBP12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Npr1P18293 1057 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cetn1P41209 172 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 RalaP63321 206 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Eif4ebp2P70445 120 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Pi4k2aQ2TBE6 479 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Tmem35bQ3U0Y2 150 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Afg1lQ3V384 480 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Bfsp2Q6NVD9 416 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 OcrlQ6NVF0 900 aa12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms