RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Tdrd1Q99MV1 1172 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Psma6Q9QUM9 246 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Trpc2Q9R244 1172 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Rgs22G3UYX5 1258 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gosr1O88630 250 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 PcnaP17918 261 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pik3r1P26450 724 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ccdc61Q3UJV1 511 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Fcho2Q3UQN2 809 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Khdrbs1Q60749 443 aaKnown RBP9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Bhlhb9Q6PB60 539 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Bud31Q6PGH1 103 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Kcnt1Q6ZPR4 1224 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 MogsQ80UM7 834 aaKnown RBP9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Rft1Q8C3B8 541 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Lurap1Q9D6I9 239 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Zbtb18Q9WUK6 522 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tmem94Q7TSH8 1360 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tmem245B1AZA5 876 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Myo1eE9Q634 1107 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm597E9Q8J5 896 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 IduaP48441 634 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Epas1P97481 874 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 HgsnatQ3UDW8 656 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ppp1r13bQ62415 1087 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 SyncripQ7TMK9 623 aaKnown RBP9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Kansl1Q80TG1 1036 aaKnown RBP9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Znf775Q8BI73 538 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Calhm5Q8R100 309 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cyp4f3Q99N16 524 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pbld1Q9DCG6 288 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Plod3Q9R0E1 741 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Suclg2Q9Z2I8 433 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cdc25bP30306 576 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Mapkapk2P49138 386 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 AurkaP97477 395 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 DtymkP97930 212 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Nab1Q61122 486 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Snta1Q61234 503 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Q6DIA7 600 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 SnphQ80U23 495 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pank1Q8K4K6 548 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Eaf2Q91ZD6 262 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 GarsQ9CZD3 729 aaKnown RBP9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 P2rx7Q9Z1M0 595 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ppef1O35655 650 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pcdh12O55134 1180 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Akr1b1P45376 316 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Eme2Q56A04 373 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 SpopQ6ZWS8 374 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Llgl1Q80Y17 1036 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Zfp454Q80Y34 536 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Clca2Q8BG22 942 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gga1Q8R0H9 635 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pcdhb15Q91Y04 786 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 DarsQ922B2 501 aaKnown RBP9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Stk33Q924X7 491 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Satl1Q9D5N8 744 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Dmrtc1Q9D9R7 182 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ncam1P13595 1115 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Rab17P35292 214 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Rad23aP54726 363 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Actn4P57780 912 aaKnown RBP9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Meis2P97367 477 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ccl7Q03366 97 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Kcnh6Q32ME0 950 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Klhl29Q80T74 875 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 St7lQ8K4P7 559 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Nae1Q8VBW6 534 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Micu1Q8VCX5 477 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Col25a1Q99MQ5 666 aa9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Drg2Q9QXB9 364 aaKnown RBP9.24□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Osbpl9A2A8Z1 736 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cypt3B1AY64 174 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Srsf11E9Q6E5 511 aaKnown RBP9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm16506F7ANP4 213 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm21750L7N228 499 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Il1rl1P14719 567 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Eml4Q3UMY5 988 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ccdc117Q6PB51 277 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Olfr17Q7TRM9 315 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gabbr2Q80T41 940 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Adck5Q80V03 582 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 AW551984Q8BGF0 804 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cep95Q8BVV7 827 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ccdc187Q8C5V8 958 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Zbtb1Q91VL9 713 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Actr3Q99JY9 418 aaKnown RBP9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Dpp3Q99KK7 738 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 4933421I07RikQ9D420 214 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Syt10Q9R0N4 523 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 A630010A05RikA9C473 232 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tmem45a2B7ZWJ5 289 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Acad12D3Z7X0 555 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Mapkapk5O54992 473 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ptpn12P35831 775 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cct8P42932 548 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 CebpzP53569 1052 aaKnown RBP9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Slc12a3P59158 1002 aa9.23□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ccdc106Q3ULM0 279 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms