RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Riok3Q9DBU3 519 aaKnown RBP9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Serpina1fQ9DCQ7 411 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 St6galnac4Q9R2B6 360 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Noc2lQ9WV70 747 aaKnown RBP9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Rpl9-ps1S4R1R7 191 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Cyp4a12bA2A974 508 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gm21293E9Q4G9 266 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gm3460E9QAI8 215 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Vmn2r100E9QAZ9 850 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Scrg1O88745 98 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ugt3a1Q3UP75 523 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Mapre1Q61166 268 aaKnown RBP9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Hsph1Q61699 858 aaKnown RBP9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Zdhhc24Q6IR37 284 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 RbfaQ6P3B9 350 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Zbtb9Q8CDC7 459 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Mill1Q8HWE7 395 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Cyp4a12aQ91WL5 508 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gemin2Q9CQQ4 269 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 MtrexQ9CZU3 1040 aaKnown RBP9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 3830403N18RikQ9D6C3 208 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Capn9Q9D805 690 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 LactbQ9EP89 551 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gfra4Q9JJT2 260 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Bace2Q9JL18 514 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Sgk1Q9WVC6 431 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Fam81bA0A140LI28 432 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Exoc3l2D3YUP5 789 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Kcnt2D3Z649 1135 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Daw1D3Z7A5 415 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Grip2G3XA20 1042 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Dmp1O55188 503 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Lrrc6O88978 473 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 P04214 136 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Glb1P23780 647 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 HpdP49429 393 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Wdr5P61965 334 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Zhx1P70121 873 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Hrh2P97292 397 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Adcy8P97490 1249 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 GscQ02591 256 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 GsapQ3TCV3 858 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Spout1Q3UHX9 385 aaKnown RBP9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Msi1Q61474 362 aaKnown RBP9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Tatdn1Q6P8M1 295 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Kif11Q6P9P6 1052 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ppm1eQ80TL0 749 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Tmem169Q8BG50 297 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Q8BGC1 442 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Q8BHN7 327 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Dus1lQ8C2P3 475 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Kctd12bQ8C7J6 292 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Tmem30aQ8VEK0 364 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Htra3Q9D236 459 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Dlgap1Q9D415 992 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 4930548H24RikQ9D496 437 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Fundc1Q9DB70 155 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Slc2a5Q9WV38 501 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Plxna1P70206 1894 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Atp8b4A2ANX3 1194 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ism1A2ATD1 454 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ces1bD3Z5G7 567 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 C87414E9PWI7 475 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Cyp4f40G3UW81 524 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Akr1b10G5E895 316 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ppargc1aO70343 797 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Mup5P11591 180 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ptger1P35375 405 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 FynP39688 537 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Timm13P62075 95 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 SbdsP70122 250 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Pde1bQ01065 535 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Slc38a5Q3U1J0 479 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Afg1lQ3V384 480 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Slc5a10Q5SWY8 596 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Znf185Q62394 352 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 DazlQ64368 298 aaKnown RBP9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Fnip1Q68FD7 1165 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Retreg2Q6NS82 541 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Vmn2r43Q80Z08 845 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Efcab14Q8BGQ6 484 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Fndc3aQ8BX90 1198 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Q922M7 232 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Bbox1Q924Y0 387 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Erap1Q9EQH2 930 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Diaph3Q9Z207 1171 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Zfp236S4R299 1847 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 4930402K13RikB1AW18 415 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 DgkdE9PUQ8 1220 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gm11239E9Q5Z9 360 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gm11237F2Z3W5 360 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gm11238F2Z478 360 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Oaz2O08608 189 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Akap1O08715 857 aaKnown RBP9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Nfatc2ipO09130 412 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ess2O70279 479 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Oas1aP11928 367 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 PdgfraP26618 1089 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Usp46P62069 366 aa9.06□□□□□ -0.96
Trim39-201ENSMUST00000042717 Serpina5P70458 405 aa9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms