RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 MsraQ9D6Y7 233 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pgam1Q9DBJ1 254 aa10.64□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Arhgef37A1IGU4 676 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Znf804aA2AKY4 1200 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Vmn2r104E9Q2J5 860 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 2210016F16RikG3X8U3 338 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 AmhP27106 555 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Kpnb1P70168 876 aaKnown RBP10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Grm1P97772 1199 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Aars2Q14CH7 980 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Tgfbrap1Q3UR70 860 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 ScinQ60604 715 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Q6GQV0 436 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ephx4Q6IE26 359 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Fam167aQ6P1G6 215 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sbk1Q8QZX0 417 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 TgdsQ8VDR7 355 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dnajc9Q91WN1 259 aaKnown RBP10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Creld1Q91XD7 420 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gprc5dQ9JIL6 344 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 RalbQ9JIW9 206 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Trpm5Q9JJH7 1158 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 A0A1Y7VP24 259 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Acnat1A2AKK5 416 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 March10E9PX79 788 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 1700024B05RikE9Q6D7 167 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Kcna3P16390 528 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ces1cP23953 554 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Slc1a2P43006 572 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Fam83fQ3UKU4 495 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Satb1Q60611 764 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Kcna5Q61762 602 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Styk1Q6J9G1 429 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ticam2Q8BJQ4 232 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Angel2Q8K1C0 544 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Tbc1d13Q8R3D1 400 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 1700018B08RikQ9DA83 213 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Serpina1fQ9DCQ7 411 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Erap1Q9EQH2 930 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Jph2Q9ET78 696 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dcun1d1Q9QZ73 259 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Myo5bP21271 1818 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Zfp558E9Q1J0 407 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm8897L7N294 181 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 FaahO08914 579 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Srpk1O70551 648 aaKnown RBP10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Zfy1P10925 782 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rbp1Q00915 135 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Cdk16Q04735 496 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 1700061G19RikQ08EE8 705 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Fam8a1Q3URQ4 399 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Casc4Q6P2L7 435 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Chsy1Q6ZQ11 800 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Zswim6Q80TB7 1207 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ccdc28bQ8CEG5 200 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Kat5Q8CHK4 513 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Plcb4Q91UZ1 1175 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Epn3Q91W69 636 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Frmd4bQ920B0 1035 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Znf654Q9DAU9 571 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Prl2a1Q9JHK0 228 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Fbxo16Q9QZM9 334 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ddx39bQ9Z1N5 428 aaKnown RBP10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 AlpiF8VPQ6 554 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 H2-Eb1P04230 264 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Mmp13P33435 472 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 AdssP46664 456 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 CiitaP79621 1155 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rxfp1Q6R6I7 758 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 DstykQ6XUX1 927 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Amz1Q8BVF9 502 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Fbxl13Q8CDU4 790 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sugp1Q8CH02 643 aaKnown RBP10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Celf3Q8CIN6 465 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 CarfQ8VHI4 689 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sugt1Q9CX34 336 aa10.63□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Cyp4a12bA2A974 508 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ttll9A2APC3 461 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ttll6A4Q9E8 822 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 BhmtO35490 407 aaKnown RBP10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Krt6aP50446 553 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Abi2P62484 446 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Cdk7Q03147 346 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Trim35Q8C006 501 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Exd2Q8VEG4 650 aaKnown RBP10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Cyp4a12aQ91WL5 508 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Lztr1Q9CQ33 837 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 RecqlQ9Z129 648 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dhtkd1A2ATU0 921 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dennd5bA2RSQ0 1274 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pdzd8B9EJ80 1147 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm8922F6XVS9 199 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Slc27a2O35488 620 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rdh7O88451 316 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Krt4P07744 525 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 YwhazP63101 245 aaKnown RBP10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Tbc1d12Q6A039 696 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Utp14bQ6EJB6 756 aaKnown RBP10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Cdc14aQ6GQT0 603 aa10.62□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gpatch2lQ6PE65 482 aa10.62□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms