RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Epm2aip1Q8VEH5 606 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Dgcr6O35347 198 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Smyd1P97443 490 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gpatch4Q3TFK5 415 aaKnown RBP14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Fnip1Q68FD7 1165 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Mief1Q8BGV8 463 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ddi2A2ADY9 399 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Vsx2Q61412 361 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Snx17Q8BVL3 470 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Commd2Q8BXC6 199 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Alx1Q8C8B0 326 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Btbd7Q8CFE5 1130 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 E2f4Q8R0K9 410 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 AdigQ8R400 80 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Asz1Q8VD46 475 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tc2nQ91XT6 489 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Exosc4Q921I9 245 aaKnown RBP14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Flt1P35969 1333 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ccng1P51945 294 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Afg1lQ3V384 480 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Thnsl1Q8BH55 747 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Kbtbd13Q8C828 458 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Taf6lQ8R2K4 616 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pwp1Q99LL5 501 aaKnown RBP14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Zfy2P20662 777 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Cyp17a1P27786 507 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gbx2P48031 348 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gtf3c4Q8BMQ2 817 aaKnown RBP14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Taf5Q8C092 801 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Fig4Q91WF7 907 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Kiaa0232Q80U59 1396 aaKnown RBP14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gm8113E0CXS8 587 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ass1P16460 412 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Vbp1P61759 196 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tex24Q5DP50 351 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Cd34Q64314 382 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Scfd2Q8BTY8 684 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tldc1Q8K0P3 455 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Atpaf2Q91YY4 289 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ube2sQ921J4 223 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Chmp1b2Q9CQD4 199 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Sgf29Q9DA08 293 aaKnown RBP14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Dcaf6Q9DC22 876 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Adam17Q9Z0F8 827 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gm6460F6YJZ8 199 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Cpa3P15089 417 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tap1P21958 724 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Cd40lgP27548 260 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pcyox1lQ8C7K6 495 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Sertad1Q9JL10 236 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Zmym2Q9CU65 1376 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Oas1eA0A0J9YV76 386 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tcea3P23881 347 aaKnown RBP14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Nfe2Q07279 373 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Fbxo42Q6PDJ6 717 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Q8BGC1 442 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Zhx2Q8C0C0 836 aaKnown RBP14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 MkksQ9JI70 570 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Itga2bQ9QUM0 1033 aa14.34□□□□□ -0.11
Col5a1-201ENSMUST00000028280 FgrP14234 517 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 LxnP70202 222 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Fbxo28Q8BIG4 368 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Efl1Q8C0D5 1127 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Olfr449Q8VGW8 311 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Entpd5Q9WUZ9 427 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Eif2s3xQ9Z0N1 472 aaKnown RBP14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Eif2s3yQ9Z0N2 472 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pgbd1E9Q492 415 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Fgfr4Q03142 799 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ndufaf2Q59J78 168 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Epha7Q61772 998 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 DstykQ6XUX1 927 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Rab36Q8CAM5 267 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Slc35c2Q8VCX2 364 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 BrdtQ91Y44 956 aa14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ptdss1Q99LH2 473 aaKnown RBP14.33□□□□□ -0.11
Col5a1-201ENSMUST00000028280 MntO08789 591 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Pick1Q62083 416 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Atg9bQ6EBV9 922 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Nlrp10Q8CCN1 673 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Sgsm3Q8VCZ6 750 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 DcpsQ9DAR7 338 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Aldh1a3Q9JHW9 512 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Kcnq5Q9JK45 933 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Pramef6A2A8M8 474 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Tarbp1E9Q368 1579 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 MaffO54791 156 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 L1camP11627 1260 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Rin3P59729 980 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Clec12aQ504P2 267 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Dnajc11Q5U458 559 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Klhdc10Q6PAR0 439 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Polr2eQ80UW8 210 aaKnown RBP14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Cpsf4Q8BQZ5 211 aaKnown RBP14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Usp27Q8CEG8 438 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Prkab1Q9R078 270 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Ccne2Q9Z238 404 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Sdr16c6Q05A13 316 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 PrlrQ08501 608 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Psd3Q2PFD7 1037 aa14.33□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms