RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Olfr1415Q7TQS4 311 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Olfr792Q7TRH9 311 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tmtc4Q8BG19 741 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 EmsyQ8BMB0 1264 aaKnown RBP13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mgat5Q8R4G6 740 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Olfr1416Q8VGU4 312 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ugp2Q91ZJ5 508 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Znf711A2ANX9 761 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Oog1E9Q5G7 496 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mup5P11591 180 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Psen1P49769 467 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Pold1P52431 1105 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Erbb2P70424 1256 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Q3KNL4 93 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Cfap52Q5F201 620 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ddx18Q8K363 660 aaKnown RBP13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Q9CR55 154 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Copg2Q9QXK3 871 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Soat2O88908 525 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mtco1P00397 514 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Hsd17b2P51658 381 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Grid2ipQ0QWG9 1203 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Pi4k2aQ2TBE6 479 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Rpp40Q8R1F9 363 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Pcdhb3Q91XZ7 784 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gm3264L7N2C5 238 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 C1qbpO35658 278 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mxd1P50538 227 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gtf2bP62915 316 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 VegfaQ00731 214 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Samhd1Q60710 627 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Olfr297Q7TS07 310 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tmem161bQ8C2L6 487 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Wdr98Q8VC42 657 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Zbed3Q9D0L1 228 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 GOLGA7BQ9D428 167 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Sun1Q9D666 913 aaKnown RBP13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ifrd2Q9D8U0 441 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tmem59Q9QY73 323 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Plekha5E9Q6H8 1269 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gm21973F6WEZ7 68 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Nccrp1G3X9C2 266 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 E2f6O54917 272 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Klc2O88448 599 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Vps4bP46467 444 aaKnown RBP13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Slc38a5Q3U1J0 479 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Cspg5Q71M36 566 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Atg14Q8CDJ3 492 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 ThtpaQ8JZL3 224 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 HpdlQ8K248 371 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Trappc12Q8K2L8 797 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mospd1Q8VEL0 213 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Epn3Q91W69 636 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Pcdhb1Q91Y08 818 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Kdelr1Q99JH8 212 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mettl7bQ9DD20 244 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Trpv2Q9WTR1 756 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 LipaQ9Z0M5 397 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Pds5aQ6A026 1332 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Zfp990B1AVN5 605 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Itgb5O70309 798 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Clcn3P51791 818 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Slc9b2Q5BKR2 547 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Srd5a1Q68FF9 255 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ccdc117Q6PB51 277 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 LdhdQ7TNG8 484 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mcoln2Q8K595 566 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Vmn1r64Q8R2B8 320 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Homer3Q99JP6 356 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Trpc5Q9QX29 975 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Efcab12V9GXH0 673 aa13.16□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Adam15O88839 864 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 PdgfaP20033 211 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Kpna2P52293 529 aaKnown RBP13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Igsf9Q05BQ1 1179 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Krt80Q0VBK2 452 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tmcc1Q69ZZ6 649 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gm2163Q6PCY5 473 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Cwf19l2Q8BG79 887 aaKnown RBP13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Pdzph1Q8BGR1 1238 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ccser1Q8C0C4 895 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tlk1Q8C0V0 766 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Plekhg6Q8R0J1 787 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ska2Q9CR46 120 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Polr3eQ9CZT4 710 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 CrotQ9DC50 612 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Dnajc12Q9R022 198 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Atp6v0a1Q9Z1G4 839 aaKnown RBP13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Olfr271-ps1A0A1L1SQH2 283 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 MtrA6H5Y3 1253 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Krt6aP50446 553 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Phactr1Q2M3X8 580 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Armcx5Q3UZB0 606 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gm10392Q3V3I3 114 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Xpnpep1Q6P1B1 623 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ttyh3Q6P5F7 524 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Slc17a6Q8BLE7 582 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 4932411N23RikQ8C0S0 470 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Cog3Q8CI04 820 aa13.15□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Hdhd5Q91WM2 419 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms