RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C ULS1Q08562 1619 aa0.66□□□□□ -2.3
PEX12YMR026C NUP192P47054 1683 aa0.62□□□□□ -2.31
PEX12YMR026C PEP1P32319 1579 aa0.62□□□□□ -2.31
PEX12YMR026C BUD3P25558 1636 aa0.62□□□□□ -2.31
PEX12YMR026C YPR010C-AA5Z2X5 72 aa0.56□□□□□ -2.32
PEX12YMR026C YDR524C-BQ3E6R4 66 aa0.55□□□□□ -2.32
PEX12YMR026C RKR1Q04781 1562 aa0.5□□□□□ -2.33
PEX12YMR026C TOR1P35169 2470 aa0.5□□□□□ -2.33
PEX12YMR026C STU1P38198 1513 aa0.49□□□□□ -2.33
PEX12YMR026C COA2Q3E823 68 aa0.49□□□□□ -2.33
PEX12YMR026C YLL006W-AQ3E814 58 aa0.48□□□□□ -2.33
PEX12YMR026C HIR3P47171 1648 aa0.48□□□□□ -2.33
PEX12YMR026C THO2P53552 1597 aaKnown RBP0.47□□□□□ -2.33
PEX12YMR026C YOR072W-BQ3E832 53 aa0.42□□□□□ -2.34
PEX12YMR026C NUP170P38181 1502 aa0.42□□□□□ -2.34
PEX12YMR026C YGL258W-AQ3E740 77 aa0.4□□□□□ -2.35
PEX12YMR026C FIG2P25653 1609 aa0.38□□□□□ -2.35
PEX12YMR026C ATG2P53855 1592 aa0.37□□□□□ -2.35
PEX12YMR026C GCN2P15442 1659 aa0.3□□□□□ -2.36
PEX12YMR026C YBR056W-AI2HB52 66 aa0.24□□□□□ -2.37
PEX12YMR026C YOR316C-AQ3E806 69 aa0.24□□□□□ -2.37
PEX12YMR026C FLO1P32768 1537 aa0.18□□□□□ -2.38
PEX12YMR026C YHR050W-AQ05451 56 aa0.17□□□□□ -2.38
PEX12YMR026C TOR2P32600 2474 aaKnown RBP0.15□□□□□ -2.38
PEX12YMR026C FMP27Q06179 2628 aa0.15□□□□□ -2.39
PEX12YMR026C YJL133C-AQ3E7A3 74 aa0.11□□□□□ -2.39
PEX12YMR026C COX9P07255 59 aa0.1□□□□□ -2.39
PEX12YMR026C DDR2P89113 61 aa0.1□□□□□ -2.39
PEX12YMR026C YLR342W-AQ3E810 57 aa0.1□□□□□ -2.39
PEX12YMR026C NUM1Q00402 2748 aa0.07□□□□□ -2.4
PEX12YMR026C GCN1P33892 2672 aaKnown RBP0.05□□□□□ -2.4
PEX12YMR026C YDR034C-AP0C289 58 aa0.05□□□□□ -2.4
PEX12YMR026C MEC1P38111 2368 aa0.03□□□□□ -2.41
PEX12YMR026C YPR117WQ06116 2489 aa0.02□□□□□ -2.41
PEX12YMR026C DYN1P36022 4092 aa-0.01□□□□□ -2.41
PEX12YMR026C CSF1Q12150 2958 aa-0.01□□□□□ -2.41
PEX12YMR026C RPL29P05747 59 aaPredicted RBP-0.03□□□□□ -2.41
PEX12YMR026C MLP2P40457 1679 aa-0.03□□□□□ -2.41
PEX12YMR026C TEL1P38110 2787 aa-0.04□□□□□ -2.42
PEX12YMR026C IRA2P19158 3079 aa-0.05□□□□□ -2.42
PEX12YMR026C MDN1Q12019 4910 aaKnown RBP-0.05□□□□□ -2.42
PEX12YMR026C VPS13Q07878 3144 aa-0.11□□□□□ -2.43
PEX12YMR026C CHC1P22137 1653 aaKnown RBP-0.12□□□□□ -2.43
PEX12YMR026C TOM1Q03280 3268 aa-0.13□□□□□ -2.43
PEX12YMR026C YHR073W-AP0C5N7 58 aa-0.13□□□□□ -2.43
PEX12YMR026C IRA1P18963 3092 aa-0.14□□□□□ -2.43
PEX12YMR026C Q0017Q9ZZX8 53 aa-0.14□□□□□ -2.43
PEX12YMR026C TRA1P38811 3744 aa-0.16□□□□□ -2.44
PEX12YMR026C SMX2P40204 77 aaKnown RBP-0.18□□□□□ -2.44
PEX12YMR026C CUP1-1P0CX80 61 aa-0.21□□□□□ -2.44
PEX12YMR026C CUP1-2P0CX81 61 aa-0.21□□□□□ -2.44
PEX12YMR026C YML054C-AQ3E809 52 aa-0.22□□□□□ -2.44
PEX12YMR026C YJL127C-BQ3E828 52 aa-0.22□□□□□ -2.44
PEX12YMR026C TOM7P53507 60 aa-0.44□□□□□ -2.48
PEX12YMR026C YMR105W-AQ8TGS8 64 aa-0.46□□□□□ -2.48
PEX12YMR026C PMP3P87284 55 aa-0.52□□□□□ -2.49
PEX12YMR026C YDR034W-BQ6Q5X2 51 aa-0.56□□□□□ -2.5
PEX12YMR026C HOR7Q05827 59 aa-0.6□□□□□ -2.51
PEX12YMR026C Q0297Q9ZZV8 51 aa-0.63□□□□□ -2.51
PEX12YMR026C YIL046W-AQ3E7Z4 54 aa-0.64□□□□□ -2.51
PEX12YMR026C YLL066W-BQ8TGJ7 56 aa-0.68□□□□□ -2.52
PEX12YMR026C RPL39P04650 51 aa-0.85□□□□□ -2.55
PEX12YMR026C NCE101Q02820 53 aa-0.93□□□□□ -2.56
Retrieved 63 of 5,963 RNA–protein pairs in 11 ms