RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C NUP188P52593 1655 aaKnown RBP0.34□□□□□ -2.35
ATG38YLR211C CUP1-1P0CX80 61 aa0.34□□□□□ -2.36
ATG38YLR211C CUP1-2P0CX81 61 aa0.34□□□□□ -2.36
ATG38YLR211C GCN2P15442 1659 aa0.33□□□□□ -2.36
ATG38YLR211C TEL1P38110 2787 aa0.33□□□□□ -2.36
ATG38YLR211C FMP27Q06179 2628 aa0.33□□□□□ -2.36
ATG38YLR211C RPO21P04050 1733 aaKnown RBP0.33□□□□□ -2.36
ATG38YLR211C RPS27BP38711 82 aa0.32□□□□□ -2.36
ATG38YLR211C YMR001C-AQ8TGS9 76 aa0.32□□□□□ -2.36
ATG38YLR211C NUP192P47054 1683 aa0.32□□□□□ -2.36
ATG38YLR211C TOR2P32600 2474 aaKnown RBP0.32□□□□□ -2.36
ATG38YLR211C FLO1P32768 1537 aa0.31□□□□□ -2.36
ATG38YLR211C UTP20P35194 2493 aaKnown RBP0.31□□□□□ -2.36
ATG38YLR211C TOM1Q03280 3268 aa0.3□□□□□ -2.36
ATG38YLR211C USO1P25386 1790 aa0.3□□□□□ -2.36
ATG38YLR211C SIP18P50263 79 aa0.3□□□□□ -2.36
ATG38YLR211C FIG2P25653 1609 aa0.29□□□□□ -2.36
ATG38YLR211C YLR157W-DP0CE99 70 aa0.29□□□□□ -2.36
ATG38YLR211C YMR105W-AQ8TGS8 64 aa0.29□□□□□ -2.36
ATG38YLR211C TRA1P38811 3744 aa0.28□□□□□ -2.36
ATG38YLR211C YPR010C-AA5Z2X5 72 aa0.28□□□□□ -2.36
ATG38YLR211C TOS6P48560 102 aa0.28□□□□□ -2.36
ATG38YLR211C YDR524C-BQ3E6R4 66 aa0.28□□□□□ -2.36
ATG38YLR211C YBR056W-AI2HB52 66 aa0.27□□□□□ -2.37
ATG38YLR211C RPS29AP41057 56 aaKnown RBP0.27□□□□□ -2.37
ATG38YLR211C YOR008C-AQ3E7B9 74 aa0.27□□□□□ -2.37
ATG38YLR211C YKL023C-AQ2V2P3 75 aa0.26□□□□□ -2.37
ATG38YLR211C YOR192C-CQ3E736 78 aa0.26□□□□□ -2.37
ATG38YLR211C YBR230W-AQ3E762 66 aa0.26□□□□□ -2.37
ATG38YLR211C YIL046W-AQ3E7Z4 54 aa0.26□□□□□ -2.37
ATG38YLR211C MEC1P38111 2368 aa0.26□□□□□ -2.37
ATG38YLR211C DYN1P36022 4092 aa0.26□□□□□ -2.37
ATG38YLR211C MDN1Q12019 4910 aaKnown RBP0.25□□□□□ -2.37
ATG38YLR211C COA2Q3E823 68 aa0.25□□□□□ -2.37
ATG38YLR211C Q0017Q9ZZX8 53 aa0.25□□□□□ -2.37
ATG38YLR211C IRA2P19158 3079 aa0.25□□□□□ -2.37
ATG38YLR211C VPS13Q07878 3144 aa0.24□□□□□ -2.37
ATG38YLR211C IRA1P18963 3092 aa0.24□□□□□ -2.37
ATG38YLR211C HOR7Q05827 59 aa0.24□□□□□ -2.37
ATG38YLR211C YDR034W-BQ6Q5X2 51 aa0.24□□□□□ -2.37
ATG38YLR211C Q0297Q9ZZV8 51 aa0.24□□□□□ -2.37
ATG38YLR211C CSF1Q12150 2958 aa0.24□□□□□ -2.37
ATG38YLR211C PMP3P87284 55 aa0.23□□□□□ -2.37
ATG38YLR211C YML054C-AQ3E809 52 aa0.23□□□□□ -2.37
ATG38YLR211C COX9P07255 59 aa0.22□□□□□ -2.37
ATG38YLR211C YDR034C-AP0C289 58 aa0.22□□□□□ -2.37
ATG38YLR211C YGR146C-AQ8TGT9 53 aa0.22□□□□□ -2.37
ATG38YLR211C NCE101Q02820 53 aa0.21□□□□□ -2.38
ATG38YLR211C SMX2P40204 77 aaKnown RBP0.2□□□□□ -2.38
ATG38YLR211C TOM7P53507 60 aa0.2□□□□□ -2.38
ATG38YLR211C YGL258W-AQ3E740 77 aa0.2□□□□□ -2.38
ATG38YLR211C YOR072W-BQ3E832 53 aa0.2□□□□□ -2.38
ATG38YLR211C RPL39P04650 51 aa0.19□□□□□ -2.38
ATG38YLR211C DDR2P89113 61 aa0.18□□□□□ -2.38
ATG38YLR211C YLR342W-AQ3E810 57 aa0.18□□□□□ -2.38
ATG38YLR211C YHR073W-AP0C5N7 58 aa0.17□□□□□ -2.38
ATG38YLR211C YHR050W-AQ05451 56 aa0.17□□□□□ -2.38
ATG38YLR211C YJL133C-AQ3E7A3 74 aa0.17□□□□□ -2.38
ATG38YLR211C YLL066W-BQ8TGJ7 56 aa0.17□□□□□ -2.38
ATG38YLR211C RPL29P05747 59 aaPredicted RBP0.16□□□□□ -2.38
ATG38YLR211C YJL127C-BQ3E828 52 aa0.16□□□□□ -2.38
ATG38YLR211C YOR316C-AQ3E806 69 aa0.15□□□□□ -2.39
ATG38YLR211C YLL006W-AQ3E814 58 aa0.13□□□□□ -2.39
Retrieved 63 of 5,963 RNA–protein pairs in 11.1 ms