RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeastyeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EBP2YKL172W YPR010C-AA5Z2X5 72 aa0.82□□□□□ -2.28
EBP2YKL172W RKR1Q04781 1562 aa0.81□□□□□ -2.28
EBP2YKL172W NUP192P47054 1683 aa0.79□□□□□ -2.28
EBP2YKL172W THO2P53552 1597 aaKnown RBP0.76□□□□□ -2.29
EBP2YKL172W YDR524C-BQ3E6R4 66 aa0.76□□□□□ -2.29
EBP2YKL172W TAO3P40468 2376 aa0.76□□□□□ -2.29
EBP2YKL172W STU1P38198 1513 aa0.74□□□□□ -2.29
EBP2YKL172W YGL258W-AQ3E740 77 aa0.74□□□□□ -2.29
EBP2YKL172W BUD3P25558 1636 aa0.74□□□□□ -2.29
EBP2YKL172W NUP170P38181 1502 aa0.74□□□□□ -2.29
EBP2YKL172W YLL006W-AQ3E814 58 aa0.72□□□□□ -2.29
EBP2YKL172W YOR072W-BQ3E832 53 aa0.72□□□□□ -2.29
EBP2YKL172W RPS29AP41057 56 aaKnown RBP0.71□□□□□ -2.3
EBP2YKL172W HIR3P47171 1648 aa0.71□□□□□ -2.3
EBP2YKL172W COX9P07255 59 aa0.7□□□□□ -2.3
EBP2YKL172W YOR316C-AQ3E806 69 aa0.64□□□□□ -2.31
EBP2YKL172W ATG2P53855 1592 aa0.64□□□□□ -2.31
EBP2YKL172W SMX2P40204 77 aaKnown RBP0.63□□□□□ -2.31
EBP2YKL172W YLR342W-AQ3E810 57 aa0.63□□□□□ -2.31
EBP2YKL172W YBR056W-AI2HB52 66 aa0.62□□□□□ -2.31
EBP2YKL172W YJL133C-AQ3E7A3 74 aa0.62□□□□□ -2.31
EBP2YKL172W DDR2P89113 61 aa0.61□□□□□ -2.31
EBP2YKL172W FIG2P25653 1609 aa0.59□□□□□ -2.32
EBP2YKL172W GCN2P15442 1659 aa0.58□□□□□ -2.32
EBP2YKL172W MLP2P40457 1679 aa0.57□□□□□ -2.32
EBP2YKL172W UTP20P35194 2493 aaKnown RBP0.55□□□□□ -2.32
EBP2YKL172W TOR1P35169 2470 aa0.54□□□□□ -2.32
EBP2YKL172W YDR034C-AP0C289 58 aa0.53□□□□□ -2.32
EBP2YKL172W CHC1P22137 1653 aaKnown RBP0.53□□□□□ -2.33
EBP2YKL172W YHR050W-AQ05451 56 aa0.51□□□□□ -2.33
EBP2YKL172W FLO1P32768 1537 aa0.5□□□□□ -2.33
EBP2YKL172W YJL127C-BQ3E828 52 aa0.48□□□□□ -2.33
EBP2YKL172W RPL29P05747 59 aaPredicted RBP0.47□□□□□ -2.33
EBP2YKL172W YHR073W-AP0C5N7 58 aa0.45□□□□□ -2.34
EBP2YKL172W YML054C-AQ3E809 52 aa0.42□□□□□ -2.34
EBP2YKL172W TOM7P53507 60 aa0.4□□□□□ -2.35
EBP2YKL172W Q0017Q9ZZX8 53 aa0.4□□□□□ -2.35
EBP2YKL172W PMP3P87284 55 aa0.36□□□□□ -2.35
EBP2YKL172W NUM1Q00402 2748 aa0.31□□□□□ -2.36
EBP2YKL172W TOR2P32600 2474 aaKnown RBP0.3□□□□□ -2.36
EBP2YKL172W HOR7Q05827 59 aa0.29□□□□□ -2.36
EBP2YKL172W FMP27Q06179 2628 aa0.28□□□□□ -2.37
EBP2YKL172W MEC1P38111 2368 aa0.26□□□□□ -2.37
EBP2YKL172W CUP1-1P0CX80 61 aa0.26□□□□□ -2.37
EBP2YKL172W CUP1-2P0CX81 61 aa0.26□□□□□ -2.37
EBP2YKL172W YPR117WQ06116 2489 aa0.26□□□□□ -2.37
EBP2YKL172W GCN1P33892 2672 aaKnown RBP0.24□□□□□ -2.37
EBP2YKL172W MDN1Q12019 4910 aaKnown RBP0.19□□□□□ -2.38
EBP2YKL172W TEL1P38110 2787 aa0.19□□□□□ -2.38
EBP2YKL172W NCE101Q02820 53 aa0.15□□□□□ -2.39
EBP2YKL172W DYN1P36022 4092 aa0.13□□□□□ -2.39
EBP2YKL172W YMR105W-AQ8TGS8 64 aa0.13□□□□□ -2.39
EBP2YKL172W CSF1Q12150 2958 aa0.12□□□□□ -2.39
EBP2YKL172W IRA2P19158 3079 aa0.1□□□□□ -2.39
EBP2YKL172W VPS13Q07878 3144 aa0.07□□□□□ -2.4
EBP2YKL172W IRA1P18963 3092 aa0.07□□□□□ -2.4
EBP2YKL172W TOM1Q03280 3268 aa0.06□□□□□ -2.4
EBP2YKL172W TRA1P38811 3744 aa0□□□□□ -2.41
EBP2YKL172W YLL066W-BQ8TGJ7 56 aa-0.01□□□□□ -2.41
EBP2YKL172W YDR034W-BQ6Q5X2 51 aa-0.19□□□□□ -2.44
EBP2YKL172W RPL39P04650 51 aa-0.21□□□□□ -2.44
EBP2YKL172W Q0297Q9ZZV8 51 aa-0.27□□□□□ -2.45
EBP2YKL172W YIL046W-AQ3E7Z4 54 aa-0.28□□□□□ -2.45
Retrieved 63 of 5,963 RNA–protein pairs in 46.8 ms