RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeastyeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EBP2YKL172W YPR010C-AA5Z2X5 72 aa0.82□□□□□ -2.28
EBP2YKL172W RKR1Q04781 1562 aa0.81□□□□□ -2.28
EBP2YKL172W NUP192P47054 1683 aa0.79□□□□□ -2.28
EBP2YKL172W THO2P53552 1597 aaKnown RBP0.76□□□□□ -2.29
EBP2YKL172W YDR524C-BQ3E6R4 66 aa0.76□□□□□ -2.29
EBP2YKL172W TAO3P40468 2376 aa0.76□□□□□ -2.29
EBP2YKL172W STU1P38198 1513 aa0.74□□□□□ -2.29
EBP2YKL172W YGL258W-AQ3E740 77 aa0.74□□□□□ -2.29
EBP2YKL172W BUD3P25558 1636 aa0.74□□□□□ -2.29
EBP2YKL172W NUP170P38181 1502 aa0.74□□□□□ -2.29
EBP2YKL172W YLL006W-AQ3E814 58 aa0.72□□□□□ -2.29
EBP2YKL172W YOR072W-BQ3E832 53 aa0.72□□□□□ -2.29
EBP2YKL172W RPS29AP41057 56 aaKnown RBP0.71□□□□□ -2.3
EBP2YKL172W HIR3P47171 1648 aa0.71□□□□□ -2.3
EBP2YKL172W COX9P07255 59 aa0.7□□□□□ -2.3
EBP2YKL172W YOR316C-AQ3E806 69 aa0.64□□□□□ -2.31
EBP2YKL172W ATG2P53855 1592 aa0.64□□□□□ -2.31
EBP2YKL172W SMX2P40204 77 aaKnown RBP0.63□□□□□ -2.31
EBP2YKL172W YLR342W-AQ3E810 57 aa0.63□□□□□ -2.31
EBP2YKL172W YBR056W-AI2HB52 66 aa0.62□□□□□ -2.31
EBP2YKL172W YJL133C-AQ3E7A3 74 aa0.62□□□□□ -2.31
EBP2YKL172W DDR2P89113 61 aa0.61□□□□□ -2.31
EBP2YKL172W FIG2P25653 1609 aa0.59□□□□□ -2.32
EBP2YKL172W GCN2P15442 1659 aa0.58□□□□□ -2.32
EBP2YKL172W MLP2P40457 1679 aa0.57□□□□□ -2.32
EBP2YKL172W UTP20P35194 2493 aaKnown RBP0.55□□□□□ -2.32
EBP2YKL172W TOR1P35169 2470 aa0.54□□□□□ -2.32
EBP2YKL172W YDR034C-AP0C289 58 aa0.53□□□□□ -2.32
EBP2YKL172W CHC1P22137 1653 aaKnown RBP0.53□□□□□ -2.33
EBP2YKL172W YHR050W-AQ05451 56 aa0.51□□□□□ -2.33
EBP2YKL172W FLO1P32768 1537 aa0.5□□□□□ -2.33
EBP2YKL172W YJL127C-BQ3E828 52 aa0.48□□□□□ -2.33
EBP2YKL172W RPL29P05747 59 aaPredicted RBP0.47□□□□□ -2.33
EBP2YKL172W YHR073W-AP0C5N7 58 aa0.45□□□□□ -2.34
EBP2YKL172W YML054C-AQ3E809 52 aa0.42□□□□□ -2.34
EBP2YKL172W TOM7P53507 60 aa0.4□□□□□ -2.35
EBP2YKL172W Q0017Q9ZZX8 53 aa0.4□□□□□ -2.35
EBP2YKL172W PMP3P87284 55 aa0.36□□□□□ -2.35
EBP2YKL172W NUM1Q00402 2748 aa0.31□□□□□ -2.36
EBP2YKL172W TOR2P32600 2474 aaKnown RBP0.3□□□□□ -2.36
EBP2YKL172W HOR7Q05827 59 aa0.29□□□□□ -2.36
EBP2YKL172W FMP27Q06179 2628 aa0.28□□□□□ -2.37
EBP2YKL172W MEC1P38111 2368 aa0.26□□□□□ -2.37
EBP2YKL172W CUP1-1P0CX80 61 aa0.26□□□□□ -2.37
EBP2YKL172W CUP1-2P0CX81 61 aa0.26□□□□□ -2.37
EBP2YKL172W YPR117WQ06116 2489 aa0.26□□□□□ -2.37
EBP2YKL172W GCN1P33892 2672 aaKnown RBP0.24□□□□□ -2.37
EBP2YKL172W MDN1Q12019 4910 aaKnown RBP0.19□□□□□ -2.38
EBP2YKL172W TEL1P38110 2787 aa0.19□□□□□ -2.38
EBP2YKL172W NCE101Q02820 53 aa0.15□□□□□ -2.39
EBP2YKL172W DYN1P36022 4092 aa0.13□□□□□ -2.39
EBP2YKL172W YMR105W-AQ8TGS8 64 aa0.13□□□□□ -2.39
EBP2YKL172W CSF1Q12150 2958 aa0.12□□□□□ -2.39
EBP2YKL172W IRA2P19158 3079 aa0.1□□□□□ -2.39
EBP2YKL172W VPS13Q07878 3144 aa0.07□□□□□ -2.4
EBP2YKL172W IRA1P18963 3092 aa0.07□□□□□ -2.4
EBP2YKL172W TOM1Q03280 3268 aa0.06□□□□□ -2.4
EBP2YKL172W TRA1P38811 3744 aa0□□□□□ -2.41
EBP2YKL172W YLL066W-BQ8TGJ7 56 aa-0.01□□□□□ -2.41
EBP2YKL172W YDR034W-BQ6Q5X2 51 aa-0.19□□□□□ -2.44
EBP2YKL172W RPL39P04650 51 aa-0.21□□□□□ -2.44
EBP2YKL172W Q0297Q9ZZV8 51 aa-0.27□□□□□ -2.45
EBP2YKL172W YIL046W-AQ3E7Z4 54 aa-0.28□□□□□ -2.45
Retrieved 63 of 5,963 RNA–protein pairs in 4.9 ms