RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A YLL006W-AQ3E814 58 aa0.34□□□□□ -2.36
SFT1YKL006C-A NUP192P47054 1683 aa0.33□□□□□ -2.36
SFT1YKL006C-A YPR010C-AA5Z2X5 72 aa0.33□□□□□ -2.36
SFT1YKL006C-A BUD3P25558 1636 aa0.32□□□□□ -2.36
SFT1YKL006C-A YDR524C-BQ3E6R4 66 aa0.31□□□□□ -2.36
SFT1YKL006C-A COA2Q3E823 68 aa0.3□□□□□ -2.36
SFT1YKL006C-A PEP1P32319 1579 aa0.3□□□□□ -2.36
SFT1YKL006C-A YGL258W-AQ3E740 77 aa0.28□□□□□ -2.36
SFT1YKL006C-A STU1P38198 1513 aa0.27□□□□□ -2.37
SFT1YKL006C-A YOR072W-BQ3E832 53 aa0.26□□□□□ -2.37
SFT1YKL006C-A HIR3P47171 1648 aa0.25□□□□□ -2.37
SFT1YKL006C-A RKR1Q04781 1562 aa0.25□□□□□ -2.37
SFT1YKL006C-A THO2P53552 1597 aaKnown RBP0.2□□□□□ -2.38
SFT1YKL006C-A UTP20P35194 2493 aaKnown RBP0.2□□□□□ -2.38
SFT1YKL006C-A GCN2P15442 1659 aa0.2□□□□□ -2.38
SFT1YKL006C-A NUP170P38181 1502 aa0.18□□□□□ -2.38
SFT1YKL006C-A ATG2P53855 1592 aa0.18□□□□□ -2.38
SFT1YKL006C-A FIG2P25653 1609 aa0.16□□□□□ -2.38
SFT1YKL006C-A TOR1P35169 2470 aa0.15□□□□□ -2.39
SFT1YKL006C-A YHR050W-AQ05451 56 aa0.09□□□□□ -2.4
SFT1YKL006C-A YOR316C-AQ3E806 69 aa0.09□□□□□ -2.4
SFT1YKL006C-A FLO1P32768 1537 aa0.06□□□□□ -2.4
SFT1YKL006C-A YJL133C-AQ3E7A3 74 aa0.04□□□□□ -2.4
SFT1YKL006C-A YBR056W-AI2HB52 66 aa0.03□□□□□ -2.4
SFT1YKL006C-A YLR342W-AQ3E810 57 aa0.02□□□□□ -2.41
SFT1YKL006C-A YDR034C-AP0C289 58 aa0□□□□□ -2.41
SFT1YKL006C-A DDR2P89113 61 aa0□□□□□ -2.41
SFT1YKL006C-A COX9P07255 59 aa-0.02□□□□□ -2.41
SFT1YKL006C-A RPL29P05747 59 aaPredicted RBP-0.06□□□□□ -2.42
SFT1YKL006C-A TOR2P32600 2474 aaKnown RBP-0.12□□□□□ -2.43
SFT1YKL006C-A Q0017Q9ZZX8 53 aa-0.13□□□□□ -2.43
SFT1YKL006C-A MLP2P40457 1679 aa-0.14□□□□□ -2.43
SFT1YKL006C-A YHR073W-AP0C5N7 58 aa-0.16□□□□□ -2.44
SFT1YKL006C-A FMP27Q06179 2628 aa-0.16□□□□□ -2.44
SFT1YKL006C-A MEC1P38111 2368 aa-0.17□□□□□ -2.44
SFT1YKL006C-A DYN1P36022 4092 aa-0.17□□□□□ -2.44
SFT1YKL006C-A YPR117WQ06116 2489 aa-0.17□□□□□ -2.44
SFT1YKL006C-A YJL127C-BQ3E828 52 aa-0.17□□□□□ -2.44
SFT1YKL006C-A YML054C-AQ3E809 52 aa-0.18□□□□□ -2.44
SFT1YKL006C-A CHC1P22137 1653 aaKnown RBP-0.2□□□□□ -2.44
SFT1YKL006C-A SMX2P40204 77 aaKnown RBP-0.2□□□□□ -2.44
SFT1YKL006C-A TOM7P53507 60 aa-0.35□□□□□ -2.47
SFT1YKL006C-A PMP3P87284 55 aa-0.4□□□□□ -2.47
SFT1YKL006C-A TEL1P38110 2787 aa-0.44□□□□□ -2.48
SFT1YKL006C-A GCN1P33892 2672 aaKnown RBP-0.47□□□□□ -2.48
SFT1YKL006C-A CUP1-1P0CX80 61 aa-0.49□□□□□ -2.49
SFT1YKL006C-A CUP1-2P0CX81 61 aa-0.49□□□□□ -2.49
SFT1YKL006C-A HOR7Q05827 59 aa-0.49□□□□□ -2.49
SFT1YKL006C-A CSF1Q12150 2958 aa-0.51□□□□□ -2.49
SFT1YKL006C-A MDN1Q12019 4910 aaKnown RBP-0.54□□□□□ -2.5
SFT1YKL006C-A YMR105W-AQ8TGS8 64 aa-0.56□□□□□ -2.5
SFT1YKL006C-A TRA1P38811 3744 aa-0.56□□□□□ -2.5
SFT1YKL006C-A IRA1P18963 3092 aa-0.63□□□□□ -2.51
SFT1YKL006C-A NCE101Q02820 53 aa-0.76□□□□□ -2.53
SFT1YKL006C-A YLL066W-BQ8TGJ7 56 aa-0.77□□□□□ -2.53
SFT1YKL006C-A NUM1Q00402 2748 aa-0.78□□□□□ -2.53
SFT1YKL006C-A IRA2P19158 3079 aa-0.83□□□□□ -2.54
SFT1YKL006C-A VPS13Q07878 3144 aa-0.92□□□□□ -2.56
SFT1YKL006C-A RPL39P04650 51 aa-1.17□□□□□ -2.6
SFT1YKL006C-A TOM1Q03280 3268 aa-1.31□□□□□ -2.62
SFT1YKL006C-A YIL046W-AQ3E7Z4 54 aa-1.57□□□□□ -2.66
SFT1YKL006C-A Q0297Q9ZZV8 51 aa-1.72□□□□□ -2.68
SFT1YKL006C-A YDR034W-BQ6Q5X2 51 aa-2.42□□□□□ -2.8
Retrieved 63 of 5,963 RNA–protein pairs in 31.4 ms