RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C RKR1Q04781 1562 aa0.52□□□□□ -2.33
PBP4YDL053C NUP192P47054 1683 aa0.52□□□□□ -2.33
PBP4YDL053C TAO3P40468 2376 aa0.52□□□□□ -2.33
PBP4YDL053C COA2Q3E823 68 aa0.5□□□□□ -2.33
PBP4YDL053C YLL006W-AQ3E814 58 aa0.49□□□□□ -2.33
PBP4YDL053C THO2P53552 1597 aaKnown RBP0.49□□□□□ -2.33
PBP4YDL053C STU1P38198 1513 aa0.48□□□□□ -2.33
PBP4YDL053C YGL258W-AQ3E740 77 aa0.48□□□□□ -2.33
PBP4YDL053C YDR524C-BQ3E6R4 66 aa0.47□□□□□ -2.33
PBP4YDL053C BUD3P25558 1636 aa0.46□□□□□ -2.34
PBP4YDL053C YOR072W-BQ3E832 53 aa0.46□□□□□ -2.34
PBP4YDL053C NUP170P38181 1502 aa0.46□□□□□ -2.34
PBP4YDL053C RPS29AP41057 56 aaKnown RBP0.45□□□□□ -2.34
PBP4YDL053C HIR3P47171 1648 aa0.45□□□□□ -2.34
PBP4YDL053C COX9P07255 59 aa0.44□□□□□ -2.34
PBP4YDL053C SMX2P40204 77 aaKnown RBP0.44□□□□□ -2.34
PBP4YDL053C YLR342W-AQ3E810 57 aa0.42□□□□□ -2.34
PBP4YDL053C YJL133C-AQ3E7A3 74 aa0.41□□□□□ -2.34
PBP4YDL053C YOR316C-AQ3E806 69 aa0.41□□□□□ -2.34
PBP4YDL053C ATG2P53855 1592 aa0.4□□□□□ -2.34
PBP4YDL053C FIG2P25653 1609 aa0.4□□□□□ -2.35
PBP4YDL053C DDR2P89113 61 aa0.39□□□□□ -2.35
PBP4YDL053C UTP20P35194 2493 aaKnown RBP0.38□□□□□ -2.35
PBP4YDL053C GCN2P15442 1659 aa0.37□□□□□ -2.35
PBP4YDL053C TOR1P35169 2470 aa0.37□□□□□ -2.35
PBP4YDL053C MLP2P40457 1679 aa0.37□□□□□ -2.35
PBP4YDL053C CHC1P22137 1653 aaKnown RBP0.34□□□□□ -2.35
PBP4YDL053C YDR034C-AP0C289 58 aa0.34□□□□□ -2.36
PBP4YDL053C YHR050W-AQ05451 56 aa0.31□□□□□ -2.36
PBP4YDL053C YJL127C-BQ3E828 52 aa0.31□□□□□ -2.36
PBP4YDL053C FLO1P32768 1537 aa0.31□□□□□ -2.36
PBP4YDL053C RPL29P05747 59 aaPredicted RBP0.29□□□□□ -2.36
PBP4YDL053C YHR073W-AP0C5N7 58 aa0.28□□□□□ -2.36
PBP4YDL053C TOM7P53507 60 aa0.28□□□□□ -2.36
PBP4YDL053C YML054C-AQ3E809 52 aa0.25□□□□□ -2.37
PBP4YDL053C Q0017Q9ZZX8 53 aa0.25□□□□□ -2.37
PBP4YDL053C PMP3P87284 55 aa0.21□□□□□ -2.38
PBP4YDL053C FMP27Q06179 2628 aa0.21□□□□□ -2.38
PBP4YDL053C TOR2P32600 2474 aaKnown RBP0.21□□□□□ -2.38
PBP4YDL053C DYN1P36022 4092 aa0.2□□□□□ -2.38
PBP4YDL053C YPR117WQ06116 2489 aa0.19□□□□□ -2.38
PBP4YDL053C MEC1P38111 2368 aa0.18□□□□□ -2.38
PBP4YDL053C HOR7Q05827 59 aa0.17□□□□□ -2.38
PBP4YDL053C CSF1Q12150 2958 aa0.15□□□□□ -2.39
PBP4YDL053C TRA1P38811 3744 aa0.14□□□□□ -2.39
PBP4YDL053C TEL1P38110 2787 aa0.12□□□□□ -2.39
PBP4YDL053C GCN1P33892 2672 aaKnown RBP0.11□□□□□ -2.39
PBP4YDL053C NCE101Q02820 53 aa0.08□□□□□ -2.4
PBP4YDL053C IRA1P18963 3092 aa0.06□□□□□ -2.4
PBP4YDL053C YMR105W-AQ8TGS8 64 aa0.03□□□□□ -2.4
PBP4YDL053C IRA2P19158 3079 aa0.02□□□□□ -2.41
PBP4YDL053C CUP1-1P0CX80 61 aa0.01□□□□□ -2.41
PBP4YDL053C CUP1-2P0CX81 61 aa0.01□□□□□ -2.41
PBP4YDL053C NUM1Q00402 2748 aa-0.03□□□□□ -2.41
PBP4YDL053C YLL066W-BQ8TGJ7 56 aa-0.03□□□□□ -2.41
PBP4YDL053C VPS13Q07878 3144 aa-0.03□□□□□ -2.41
PBP4YDL053C YBR056W-AI2HB52 66 aa-0.08□□□□□ -2.42
PBP4YDL053C MDN1Q12019 4910 aaKnown RBP-0.09□□□□□ -2.42
PBP4YDL053C RPL39P04650 51 aa-0.15□□□□□ -2.43
PBP4YDL053C TOM1Q03280 3268 aa-0.35□□□□□ -2.46
PBP4YDL053C YIL046W-AQ3E7Z4 54 aa-0.36□□□□□ -2.47
PBP4YDL053C Q0297Q9ZZV8 51 aa-0.48□□□□□ -2.49
PBP4YDL053C YDR034W-BQ6Q5X2 51 aa-1.02□□□□□ -2.57
Retrieved 63 of 5,963 RNA–protein pairs in 6.1 ms