RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	PAEP	P09466	180 aa		15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939	VDR	P11473	427 aa		15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939	GJA4	P35212	333 aa		15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939	BCAT1	P54687	386 aa		15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939	MAMSTR	Q6ZN01	415 aa		15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939	PIGZ	Q86VD9	579 aa		15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939	TTC30A	Q86WT1	665 aa		15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939	ZFR	Q96KR1	1074 aa	Known RBP	15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939	THAP9	Q9H5L6	903 aa		15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939	CYLD	Q9NQC7	956 aa		15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939	RBM12	Q9NTZ6	932 aa	Known RBP	15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939	OSER1	Q9NX31	292 aa		15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939	USP3	Q9Y6I4	520 aa		15.84	■□□□□ 0.13
PHGDH-231	ENST00000641939		A0A1W2PQH9	124 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	E2F8	A0AVK6	867 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939		O00370	1275 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	TRDMT1	O14717	391 aa	Known RBP	15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	ATP5C1	P36542	298 aa	Known RBP	15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	MTIF2	P46199	727 aa	Known RBP	15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	PSEN1	P49768	467 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	CSTF1	Q05048	431 aa	Known RBP	15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	PDE4C	Q08493	712 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	BST2	Q10589	180 aa	Known RBP	15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	GRSF1	Q12849	480 aa	Known RBP eCLIP	15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	CCIN	Q13939	588 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	ZNF528	Q3MIS6	628 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	TMEM196	Q5HYL7	178 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	CT47A1	Q5JQC4	288 aa	Predicted RBP	15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	RAB41	Q5JT25	222 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	FAM114A1	Q8IWE2	563 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	SYNPO	Q8N3V7	929 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	EXOC4	Q96A65	974 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	KREMEN1	Q96MU8	473 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	NMUR1	Q9HB89	426 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	NAGPA	Q9UK23	515 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	WDR87	Q6ZQQ6	2873 aa		15.83	■□□□□ 0.12
PHGDH-231	ENST00000641939	KIAA1549L	Q6ZVL6	1849 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	EP300	Q09472	2414 aa	Predicted RBP	15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	RNF225	M0QZC1	329 aa	Predicted RBP	15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	XPO1	O14980	1071 aa	Known RBP	15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	TBX18	O95935	607 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	RARG	P13631	454 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	CCR3	P51677	355 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	GAS6	Q14393	721 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	FSTL4	Q6MZW2	842 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	KLHDC10	Q6PID8	442 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	LCLAT1	Q6UWP7	414 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	GBP6	Q6ZN66	633 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	SCD5	Q86SK9	330 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	TADA2B	Q86TJ2	420 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	ADGRG2	Q8IZP9	1017 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	SPEM1	Q8N4L4	309 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	ZNF276	Q8N554	614 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	RBBP8NL	Q8NC74	664 aa	Predicted RBP	15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	UBA3	Q8TBC4	463 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	TFAP2B	Q92481	460 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	P2RY13	Q9BPV8	354 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	CRACR2A	Q9BSW2	395 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	UBE2T	Q9NPD8	197 aa	Predicted RBP	15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	PRMT8	Q9NR22	394 aa	Predicted RBP	15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	CLIC5	Q9NZA1	410 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	TBC1D14	Q9P2M4	693 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	SH3BP1	Q9Y3L3	701 aa		15.82	■□□□□ 0.12
PHGDH-231	ENST00000641939	GTPBP10	A4D1E9	387 aa	Known RBP	15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	TULP2	O00295	520 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	SCAMP3	O14828	347 aa	Known RBP	15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	SETSIP	P0DME0	302 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	RALA	P11233	206 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	GALK1	P51570	392 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	TKTL1	P51854	596 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	ZNF132	P52740	706 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	GOLGA8F	Q08AF8	430 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	GOLGA8DP	Q0D2H9	430 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	PPP2R5D	Q14738	602 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	STIL	Q15468	1287 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	CNGA2	Q16280	664 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	MAN2A1	Q16706	1144 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	EXOC3L4	Q17RC7	722 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	PKDCC	Q504Y2	493 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	C10orf120	Q5SQS8	335 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	NAIF1	Q69YI7	327 aa	Predicted RBP	15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	TRIM65	Q6PJ69	517 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	ZC3H14	Q6PJT7	736 aa	Known RBP	15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939		Q6ZS52	159 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	RBM43	Q6ZSC3	357 aa	Known RBP	15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	ENOSF1	Q7L5Y1	443 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	ARHGAP18	Q8N392	663 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	MYO18A	Q92614	2054 aa	Known RBP	15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	OTUB2	Q96DC9	234 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	FAM81B	Q96LP2	452 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	CDK5RAP1	Q96SZ6	601 aa	Known RBP	15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	KLF16	Q9BXK1	252 aa	Predicted RBP	15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	FBRSL1	Q9HCM7	1045 aa	Known RBP	15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	DNMT3L	Q9UJW3	386 aa		15.81	■□□□□ 0.12
PHGDH-231	ENST00000641939	ZBED1	O96006	694 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	CYP17A1	P05093	508 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	IRF1	P10914	325 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	SLC9A1	P19634	815 aa		15.8	■□□□□ 0.12
PHGDH-231	ENST00000641939	DRD1	P21728	446 aa		15.8	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms