RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 PCDHB2Q9Y5E7 798 aa8.36□□□□□ -1.07
CASC19-240ENST00000641578 SAR1BQ9Y6B6 198 aa8.36□□□□□ -1.07
CASC19-240ENST00000641578 CAPN6Q9Y6Q1 641 aa8.36□□□□□ -1.07
CASC19-240ENST00000641578 ANK1P16157 1881 aa8.36□□□□□ -1.07
CASC19-240ENST00000641578 RALGAPA2Q2PPJ7 1873 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 MYADML2A6NDP7 307 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 METTL12A8MUP2 240 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 EFCAB8A8MWE9 144 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 LACTBL1A8MY62 500 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 PRR33A8MZF0 331 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 TLR3O15455 904 aaKnown RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 TADA3O75528 432 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 CXCL8P10145 99 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 KRT5P13647 590 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 TCP1P17987 556 aaKnown RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 HOXA11P31270 313 aaPredicted RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 ZNF132P52740 706 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 GALCP54803 685 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 CHMP4BP1P59074 171 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 MYL6P60660 151 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 MRPS6P82932 125 aaKnown RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 PTPN11Q06124 597 aaPredicted RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 CKAP4Q07065 602 aaKnown RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 ZNF423Q2M1K9 1284 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 SLC10A6Q3KNW5 377 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 CCSAPQ6IQ19 270 aaPredicted RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 CXCL17Q6UXB2 119 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 TRIM72Q6ZMU5 477 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 TTLL10Q6ZVT0 673 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 SLC47A2Q86VL8 602 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 RHOT2Q8IXI1 618 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 RPUSD2Q8IZ73 545 aaKnown RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 SYCE1Q8N0S2 351 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 TTC39CQ8N584 583 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 ZSCAN18Q8TBC5 510 aaPredicted RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 SLC20A1Q8WUM9 679 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 RFFLQ8WZ73 363 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 DDX1Q92499 740 aaKnown RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 CPB2Q96IY4 423 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 RPGRIP1Q96KN7 1286 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 DMRTB1Q96MA1 342 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 PPP1R16BQ96T49 567 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 CELF4Q9BZC1 486 aaKnown RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 XYLT2Q9H1B5 865 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 GSX1Q9H4S2 264 aaPredicted RBP8.35□□□□□ -1.07
CASC19-240ENST00000641578 FAM105AQ9NUU6 356 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 LMCD1Q9NZU5 365 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 ITGA11Q9UKX5 1188 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 SNX12Q9UMY4 172 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 NUB1Q9Y5A7 615 aa8.35□□□□□ -1.07
CASC19-240ENST00000641578 TRIM43BA6NCK2 446 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 M0QZ92 97 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 CES2O00748 559 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 MEFVO15553 781 aaPredicted RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 PQBP1O60828 265 aaKnown RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 CSDE1O75534 798 aaKnown RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 MTA2O94776 668 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 NPTXRO95502 500 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 TSPAN15O95858 294 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 PGK1P00558 417 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 TIMP1P01033 207 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 CST3P01034 146 aaPredicted RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 ATP1A1P05023 1023 aaKnown RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 CYP11A1P05108 521 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 P4HA1P13674 534 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 MAOBP27338 520 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 CD96P40200 585 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 YARSP54577 528 aaKnown RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 NAP1L1P55209 391 aaKnown RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 OSTNP61366 133 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 GPC5P78333 572 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 ZNF200P98182 395 aaPredicted RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 FMO1Q01740 532 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 PCDH1Q08174 1060 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 TMEM62Q0P6H9 643 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 TMEM132DQ14C87 1099 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 ZNF699Q32M78 642 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 HP1BP3Q5SSJ5 553 aaPredicted RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 JADE1Q6IE81 842 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 SPOPLQ6IQ16 392 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 MFSD5Q6N075 450 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 SLFN11Q7Z7L1 901 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 SERINC5Q86VE9 423 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 CDR2LQ86X02 465 aaPredicted RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 TMEM192Q8IY95 271 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 PLD6Q8N2A8 252 aaKnown RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 LRRC57Q8N9N7 239 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 RBBP8NLQ8NC74 664 aaPredicted RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 CXorf38Q8TB03 319 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 TRIM43Q96BQ3 446 aaPredicted RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 PCDHB18PQ96TA0 734 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 CARD6Q9BX69 1037 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 CLEC4MQ9H2X3 399 aaPredicted RBP8.34□□□□□ -1.07
CASC19-240ENST00000641578 CYP3A43Q9HB55 503 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 RNF14Q9UBS8 474 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 HYOU1Q9Y4L1 999 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 PCDHB4Q9Y5E5 795 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 TRPV2Q9Y5S1 764 aa8.34□□□□□ -1.07
CASC19-240ENST00000641578 A0A096LPE4 126 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms