RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 B3GALNT2Q8NCR0 500 aa15.94■□□□□ 0.14
SYNE2-228ENST00000639659 PDZD8Q8NEN9 1154 aa15.94■□□□□ 0.14
SYNE2-228ENST00000639659 HSPA12BQ96MM6 686 aa15.94■□□□□ 0.14
SYNE2-228ENST00000639659 CGRRF1Q99675 332 aa15.94■□□□□ 0.14
SYNE2-228ENST00000639659 ATP8B3O60423 1300 aa15.94■□□□□ 0.14
SYNE2-228ENST00000639659 ASPMQ8IZT6 3477 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 PHACTR2O75167 634 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 RTN3O95197 1032 aaPredicted RBP15.93■□□□□ 0.14
SYNE2-228ENST00000639659 CHRM1P11229 460 aaPredicted RBP15.93■□□□□ 0.14
SYNE2-228ENST00000639659 ASIC1P78348 528 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 SEMA3BQ13214 749 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 EGFLAMQ63HQ2 1017 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 GRAMD4Q6IC98 578 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 SLC36A4Q6YBV0 504 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 NUDT18Q6ZVK8 323 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 CHPFQ8IZ52 775 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 PHTF2Q8N3S3 785 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 TERB1Q8NA31 727 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 SCAMP5Q8TAC9 235 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 CEP76Q8TAP6 659 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 WBP2Q969T9 261 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 KCNK16Q96T55 309 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 UPF2Q9HAU5 1272 aaKnown RBP15.93■□□□□ 0.14
SYNE2-228ENST00000639659 DNAJC17Q9NVM6 304 aaKnown RBP15.93■□□□□ 0.14
SYNE2-228ENST00000639659 GMIPQ9P107 970 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 MSRB2Q9Y3D2 182 aa15.93■□□□□ 0.14
SYNE2-228ENST00000639659 NEDD8-MDP1E9PL57 170 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 NDUFS2O75306 463 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 TACC1O75410 805 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 SERPINF2P08697 491 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 NTSR1P30989 418 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 SLC5A3P53794 718 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 MYL6P60660 151 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 BIRC3Q13489 604 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 ACAP1Q15027 740 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 PREPLQ4J6C6 727 aaPredicted RBP15.92■□□□□ 0.14
SYNE2-228ENST00000639659 SPDYCQ5MJ68 293 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 SDE2Q6IQ49 451 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 KIAA1324Q6UXG2 1013 aaKnown RBP15.92■□□□□ 0.14
SYNE2-228ENST00000639659 PIP4P1Q86T03 277 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 FAM35AQ86V20 835 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 TMEM25Q86YD3 366 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 MIB1Q86YT6 1006 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 ETFBKMTQ8IXQ9 262 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 TRIML1Q8N9V2 468 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 BHMTQ93088 406 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 ELMO3Q96BJ8 720 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 ZFRQ96KR1 1074 aaKnown RBP15.92■□□□□ 0.14
SYNE2-228ENST00000639659 CAMK1GQ96NX5 476 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 ACOX2Q99424 681 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 SLC6A17Q9H1V8 727 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 SMYD3Q9H7B4 428 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 KIAA1586Q9HCI6 787 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 SPHK2Q9NRA0 654 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 RAD54BQ9Y620 910 aa15.92■□□□□ 0.14
SYNE2-228ENST00000639659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.91■□□□□ 0.14
SYNE2-228ENST00000639659 IGHV1OR15-9A0A0B4J2B8 117 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 HOXC11O43248 304 aaPredicted RBP15.91■□□□□ 0.14
SYNE2-228ENST00000639659 NDUFV2P19404 249 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 HOXD12P35452 270 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 CDH8P55286 799 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 CYP24A1Q07973 514 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 ORC1Q13415 861 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 PLEKHG6Q3KR16 790 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 ERICH6BQ5W0A0 696 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 LRSAM1Q6UWE0 723 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 TPGS1Q6ZTW0 290 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 SLC41A1Q8IVJ1 513 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 KIAA1958Q8N8K9 716 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 SCFD1Q8WVM8 642 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 JAKMIP2Q96AA8 810 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 OTUB2Q96DC9 234 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 DMAP1Q9NPF5 467 aaPredicted RBP15.91■□□□□ 0.14
SYNE2-228ENST00000639659 CD93Q9NPY3 652 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 AGPAT3Q9NRZ7 376 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 KRT82Q9NSB4 513 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 PCDHB9Q9Y5E1 797 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 PKD1L2Q7Z442 2459 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 MYH10P35580 1976 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 PCNX2A6NKB5 2137 aa15.91■□□□□ 0.14
SYNE2-228ENST00000639659 PCDH15Q96QU1 1955 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 A0A0A0MRY4 1105 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 ARHGAP33O14559 1287 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 AP1G2O75843 785 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 SYPP08247 313 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 PDCP20941 246 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 PSMD6Q15008 389 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 PEAR1Q5VY43 1037 aaPredicted RBP15.9■□□□□ 0.14
SYNE2-228ENST00000639659 C19orf48Q6RUI8 117 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 RABEPKQ7Z6M1 372 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 IPO4Q8TEX9 1081 aaKnown RBP15.9■□□□□ 0.14
SYNE2-228ENST00000639659 OVCA2Q8WZ82 227 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 SYAP1Q96A49 352 aaPredicted RBP15.9■□□□□ 0.14
SYNE2-228ENST00000639659 DHX58Q96C10 678 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 SMARCD1Q96GM5 515 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 USP28Q96RU2 1077 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 BBS2Q9BXC9 721 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 CAPN10Q9HC96 672 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 CACNA2D2Q9NY47 1150 aa15.9■□□□□ 0.14
SYNE2-228ENST00000639659 H0Y626 953 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms