RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TMEM105Q8N8V8 129 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 DNASE1L2Q92874 299 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 WBP2Q969T9 261 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 ULBP1Q9BZM6 244 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 GANQ9H2C0 597 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 KIF9Q9HAQ2 790 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 HPS4Q9NQG7 708 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 TLR8Q9NR97 1041 aaKnown RBP22.93■■□□□ 1.26
SCN1B-206ENST00000638536 SIK3Q9Y2K2 1263 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 MTF2Q9Y483 593 aaPredicted RBP22.93■■□□□ 1.26
SCN1B-206ENST00000638536 ATG2BQ96BY7 2078 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 MYO15AQ9UKN7 3530 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 TLR5O60602 858 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 MBL2P11226 248 aaPredicted RBP22.93■■□□□ 1.26
SCN1B-206ENST00000638536 UCHL3P15374 230 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 RAPGEF1Q13905 1077 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 MTF1Q14872 753 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 DRAP1Q14919 205 aaPredicted RBP22.93■■□□□ 1.26
SCN1B-206ENST00000638536 SKOR2Q2VWA4 1001 aaPredicted RBP22.93■■□□□ 1.26
SCN1B-206ENST00000638536 ARHGAP29Q52LW3 1261 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 TPRG1Q6ZUI0 275 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 FAM81BQ96LP2 452 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 LINC00597Q9H2U6 94 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 CBX8Q9HC52 389 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 TRPV5Q9NQA5 729 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 CYTH4Q9UIA0 394 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 WNT6Q9Y6F9 365 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 CACNA1IQ9P0X4 2223 aa22.93■■□□□ 1.26
SCN1B-206ENST00000638536 LGALS16A8MUM7 142 aa22.92■■□□□ 1.26
SCN1B-206ENST00000638536 STK25O00506 426 aa22.92■■□□□ 1.26
SCN1B-206ENST00000638536 MDM4O15151 490 aa22.92■■□□□ 1.26
SCN1B-206ENST00000638536 THAP12O43422 761 aa22.92■■□□□ 1.26
SCN1B-206ENST00000638536 SETSIPP0DME0 302 aa22.92■■□□□ 1.26
SCN1B-206ENST00000638536 ARSAP15289 507 aa22.92■■□□□ 1.26
SCN1B-206ENST00000638536 PFKLP17858 780 aa22.92■■□□□ 1.26
SCN1B-206ENST00000638536 GPD2P43304 727 aa22.92■■□□□ 1.26
SCN1B-206ENST00000638536 SLC8A3P57103 927 aa22.92■■□□□ 1.26
SCN1B-206ENST00000638536 ADIGQ0VDE8 80 aa22.92■■□□□ 1.26
SCN1B-206ENST00000638536 DDX23Q9BUQ8 820 aaKnown RBP22.92■■□□□ 1.26
SCN1B-206ENST00000638536 EBF3Q9H4W6 596 aa22.92■■□□□ 1.26
SCN1B-206ENST00000638536 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.92■■□□□ 1.26
SCN1B-206ENST00000638536 RARGP13631 454 aa22.91■■□□□ 1.26
SCN1B-206ENST00000638536 AVPR2P30518 371 aa22.91■■□□□ 1.26
SCN1B-206ENST00000638536 TUBP50607 506 aa22.91■■□□□ 1.26
SCN1B-206ENST00000638536 SYCP1Q15431 976 aa22.91■■□□□ 1.26
SCN1B-206ENST00000638536 PM20D1Q6GTS8 502 aa22.91■■□□□ 1.26
SCN1B-206ENST00000638536 LUZP1Q86V48 1076 aa22.91■■□□□ 1.26
SCN1B-206ENST00000638536 SLC47A2Q86VL8 602 aa22.91■■□□□ 1.26
SCN1B-206ENST00000638536 FAM71AQ8IYT1 594 aa22.91■■□□□ 1.26
SCN1B-206ENST00000638536 CYLDQ9NQC7 956 aa22.91■■□□□ 1.26
SCN1B-206ENST00000638536 FAM207AQ9NSI2 230 aaPredicted RBP22.91■■□□□ 1.26
SCN1B-206ENST00000638536 NAGPAQ9UK23 515 aa22.91■■□□□ 1.26
SCN1B-206ENST00000638536 CACNA1HO95180 2353 aa22.91■■□□□ 1.26
SCN1B-206ENST00000638536 SMTNL1A8MU46 457 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 TEX33O43247 280 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 ZBED1O96006 694 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 LCP1P13796 627 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 STILQ15468 1287 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 ASTLQ6HA08 431 aaPredicted RBP22.9■■□□□ 1.26
SCN1B-206ENST00000638536 SUGP1Q8IWZ8 645 aaKnown RBP22.9■■□□□ 1.26
SCN1B-206ENST00000638536 CLEC4CQ8WTT0 213 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 KCTD13Q8WZ19 329 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 CHFRQ96EP1 664 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 LRRC4Q9HBW1 653 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 PLCB1Q9NQ66 1216 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 THG1LQ9NWX6 298 aaKnown RBP22.9■■□□□ 1.26
SCN1B-206ENST00000638536 PIAS3Q9Y6X2 628 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 VPS13AQ96RL7 3174 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 TCF3P15923 654 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 PDE6CP51160 858 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 UBXN1Q04323 297 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 PRKCQQ04759 706 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 FKBP15Q5T1M5 1219 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 TXNDC11Q6PKC3 985 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 WDTC1Q8N5D0 677 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 CFAP97Q9P2B7 532 aa22.9■■□□□ 1.26
SCN1B-206ENST00000638536 KANSL1LA0AUZ9 987 aa22.89■■□□□ 1.25
SCN1B-206ENST00000638536 YJEFN3A6XGL0 299 aa22.89■■□□□ 1.25
SCN1B-206ENST00000638536 E7ENQ6 273 aa22.89■■□□□ 1.25
SCN1B-206ENST00000638536 DCNP07585 359 aaKnown RBP22.89■■□□□ 1.25
SCN1B-206ENST00000638536 TPM2P07951 284 aa22.89■■□□□ 1.25
SCN1B-206ENST00000638536 GLULP15104 373 aa22.89■■□□□ 1.25
SCN1B-206ENST00000638536 AOC1P19801 751 aa22.89■■□□□ 1.25
SCN1B-206ENST00000638536 CLCN5P51795 746 aa22.89■■□□□ 1.25
SCN1B-206ENST00000638536 PLCB2Q00722 1185 aa22.89■■□□□ 1.25
SCN1B-206ENST00000638536 ANKRD20A12PQ8NF67 263 aa22.89■■□□□ 1.25
SCN1B-206ENST00000638536 CSGALNACT1Q8TDX6 532 aa22.89■■□□□ 1.25
SCN1B-206ENST00000638536 OSCP1Q8WVF1 389 aa22.89■■□□□ 1.25
SCN1B-206ENST00000638536 NLRC4Q9NPP4 1024 aa22.89■■□□□ 1.25
SCN1B-206ENST00000638536 DUS2Q9NX74 493 aaKnown RBP22.89■■□□□ 1.25
SCN1B-206ENST00000638536 COL9A1P20849 921 aa22.88■■□□□ 1.25
SCN1B-206ENST00000638536 TARSP26639 723 aaKnown RBP22.88■■□□□ 1.25
SCN1B-206ENST00000638536 POLR2FP61218 127 aaKnown RBP22.88■■□□□ 1.25
SCN1B-206ENST00000638536 YWHAGP61981 247 aaKnown RBP eCLIP22.88■■□□□ 1.25
SCN1B-206ENST00000638536 EML3Q32P44 896 aa22.88■■□□□ 1.25
SCN1B-206ENST00000638536 CC2D1AQ6P1N0 951 aaPredicted RBP22.88■■□□□ 1.25
SCN1B-206ENST00000638536 PASD1Q8IV76 773 aa22.88■■□□□ 1.25
SCN1B-206ENST00000638536 ZNF687Q8N1G0 1237 aa22.88■■□□□ 1.25
SCN1B-206ENST00000638536 NAP1L5Q96NT1 182 aaPredicted RBP22.88■■□□□ 1.25
SCN1B-206ENST00000638536 KLF16Q9BXK1 252 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms