RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CHFRQ96EP1 664 aa14.56□□□□□ -0.08
PNKP-228ENST00000637325 HINFPQ9BQA5 517 aa14.56□□□□□ -0.08
PNKP-228ENST00000637325 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.56□□□□□ -0.08
PNKP-228ENST00000637325 DMDP11532 3685 aa14.56□□□□□ -0.08
PNKP-228ENST00000637325 OTOGLQ3ZCN5 2332 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 E2F8A0AVK6 867 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 PMM2O15305 246 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 P4HA2O15460 535 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 ATG13O75143 517 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 AFPP02771 609 aaKnown RBP14.55□□□□□ -0.08
PNKP-228ENST00000637325 IRF1P10914 325 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 ATP5C1P36542 298 aaKnown RBP14.55□□□□□ -0.08
PNKP-228ENST00000637325 KIF11P52732 1056 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 GOLGA8FQ08AF8 430 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 GOLGA8DPQ0D2H9 430 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 KCNH2Q12809 1159 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 FBXO43Q4G163 708 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 SGO2Q562F6 1265 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 ARHGAP17Q68EM7 881 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 TADA2BQ86TJ2 420 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 PPM1KQ8N3J5 372 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 FBRSL1Q9HCM7 1045 aaKnown RBP14.55□□□□□ -0.08
PNKP-228ENST00000637325 HESX1Q9UBX0 185 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 RWDD2AQ9UIY3 292 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 NAGPAQ9UK23 515 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 PCDHB4Q9Y5E5 795 aa14.55□□□□□ -0.08
PNKP-228ENST00000637325 A0A1W2PQH9 124 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 RNF40O75150 1001 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 TBX18O95935 607 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 ADH1CP00326 375 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 RALAP11233 206 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 VDRP11473 427 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 RARGP13631 454 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 PGFP49763 221 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 PSEN1P49768 467 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 DHCR24Q15392 516 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 TPD52L1Q16890 204 aaPredicted RBP14.54□□□□□ -0.08
PNKP-228ENST00000637325 GOLGA7BQ2TAP0 167 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 NAIF1Q69YI7 327 aaPredicted RBP14.54□□□□□ -0.08
PNKP-228ENST00000637325 TMEM270Q6UE05 265 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 TRIM59Q8IWR1 403 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 ADGRG2Q8IZP9 1017 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 ANKRD52Q8NB46 1076 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 ZBTB44Q8NCP5 570 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 EHBP1Q8NDI1 1231 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 CCDC26Q8TAB7 109 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 NELL1Q92832 810 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 UBXN6Q9BZV1 441 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 CLSTN2Q9H4D0 955 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 LSM7Q9UK45 103 aaKnown RBP14.54□□□□□ -0.08
PNKP-228ENST00000637325 KIAA1257Q9ULG3 409 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 SLC8A2Q9UPR5 921 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 GVINP1Q7Z2Y8 2422 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 WDR87Q6ZQQ6 2873 aa14.54□□□□□ -0.08
PNKP-228ENST00000637325 EML5Q05BV3 1969 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 CYP17A1P05093 508 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 BCAT1P54687 386 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 MARSP56192 900 aaKnown RBP14.53□□□□□ -0.08
PNKP-228ENST00000637325 C10orf120Q5SQS8 335 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 HEATR6Q6AI08 1181 aaKnown RBP14.53□□□□□ -0.08
PNKP-228ENST00000637325 RRAGAQ7L523 313 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 CCDC186Q7Z3E2 898 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 PIGZQ86VD9 579 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 ARHGAP18Q8N392 663 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 MLKLQ8NB16 471 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 OTUB2Q96DC9 234 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 ZFRQ96KR1 1074 aaKnown RBP14.53□□□□□ -0.08
PNKP-228ENST00000637325 NMUR1Q9HB89 426 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 LRRC4Q9HBW1 653 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 CYLDQ9NQC7 956 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 OSER1Q9NX31 292 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 DNMT3LQ9UJW3 386 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 TSPAN16Q9UKR8 245 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 RAB23Q9ULC3 237 aa14.53□□□□□ -0.08
PNKP-228ENST00000637325 GPR179Q6PRD1 2367 aa14.52□□□□□ -0.08
PNKP-228ENST00000637325 CHURC1-FNTBB4DL54 471 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 LILRB5O75023 590 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 PAPSS2O95340 614 aaPredicted RBP14.52□□□□□ -0.09
PNKP-228ENST00000637325 PAEPP09466 180 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 ADH5P11766 374 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 TDGF1P13385 188 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 PLA2G4AP47712 749 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 FNTBP49356 437 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 GAD2Q05329 585 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 BST2Q10589 180 aaKnown RBP14.52□□□□□ -0.09
PNKP-228ENST00000637325 LY6G5CQ5SRR4 150 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 BTBD8Q5XKL5 378 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 RHBDF2Q6PJF5 856 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 BBS7Q8IWZ6 715 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 RPLP0P6Q8NHW5 317 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 UBA3Q8TBC4 463 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 SECISBP2LQ93073 1101 aaKnown RBP14.52□□□□□ -0.09
PNKP-228ENST00000637325 CNOT6LQ96LI5 555 aaKnown RBP14.52□□□□□ -0.09
PNKP-228ENST00000637325 CDK5RAP1Q96SZ6 601 aaKnown RBP14.52□□□□□ -0.09
PNKP-228ENST00000637325 KLF16Q9BXK1 252 aaPredicted RBP14.52□□□□□ -0.09
PNKP-228ENST00000637325 NUP62CLQ9H1M0 184 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.52□□□□□ -0.09
PNKP-228ENST00000637325 NUDT5Q9UKK9 219 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 USP3Q9Y6I4 520 aa14.52□□□□□ -0.09
PNKP-228ENST00000637325 SPTBN4Q9H254 2564 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms