RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 FGF14Q92915 247 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 SMARCD2Q92925 531 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 ASB16Q96NS5 453 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 SLC22A12Q96S37 553 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 CYP2S1Q96SQ9 504 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 KXD1Q9BQD3 176 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 SLC4A5Q9BY07 1137 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 TLR8Q9NR97 1041 aaKnown RBP18.08■□□□□ 0.48
CLN6-218ENST00000637223 SEPT11Q9NVA2 429 aaKnown RBP18.08■□□□□ 0.48
CLN6-218ENST00000637223 OSER1Q9NX31 292 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 TJP2Q9UDY2 1190 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 NAGPAQ9UK23 515 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 LUC7L2Q9Y383 392 aaKnown RBP18.08■□□□□ 0.48
CLN6-218ENST00000637223 C5orf42Q9H799 3197 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 DOCK6Q96HP0 2047 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 TRAV19A0A0A6YYK7 116 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 E5RJQ4 531 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 GFRA3O60609 400 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 PRAMEF12O95522 483 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 FCARP24071 287 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 VIPR2P41587 438 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 TCF15Q12870 199 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 HTR4Q13639 388 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 TRIM14Q14142 442 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 NAA35Q5VZE5 725 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 PM20D1Q6GTS8 502 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 TANGO2Q6ICL3 276 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 BMP8AQ7Z5Y6 402 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 ARID3BQ8IVW6 561 aaPredicted RBP18.07■□□□□ 0.48
CLN6-218ENST00000637223 CMTM8Q8IZV2 173 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 ARL14EPQ8N8R7 260 aaPredicted RBP18.07■□□□□ 0.48
CLN6-218ENST00000637223 PPP1R13BQ96KQ4 1090 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 NOX5Q96PH1 765 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 CPXM1Q96SM3 734 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 PCDHB18PQ96TA0 734 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 PRRX2Q99811 253 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 AGPAT1Q99943 283 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 CCSER2Q9H7U1 834 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 CNGB3Q9NQW8 809 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 AIPL1Q9NZN9 384 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 NUMBLQ9Y6R0 609 aa18.07■□□□□ 0.48
CLN6-218ENST00000637223 ANHXE9PGG2 379 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 LSM8O95777 96 aaKnown RBP18.06■□□□□ 0.48
CLN6-218ENST00000637223 OAS1P00973 400 aaKnown RBP18.06■□□□□ 0.48
CLN6-218ENST00000637223 CKMP06732 381 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 SKILP12757 684 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 HDCP19113 662 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 CDH5P33151 784 aaPredicted RBP18.06■□□□□ 0.48
CLN6-218ENST00000637223 AVPR1AP37288 418 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 ACADSBP45954 432 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 RPL34P49207 117 aaKnown RBP18.06■□□□□ 0.48
CLN6-218ENST00000637223 DAOAP59103 153 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 YWHAGP61981 247 aaKnown RBP eCLIP18.06■□□□□ 0.48
CLN6-218ENST00000637223 GOLGA8FQ08AF8 430 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 GOLGA8DPQ0D2H9 430 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 PTPN20Q4JDL3 420 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 HECTD3Q5T447 861 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 SNX30Q5VWJ9 437 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 MTSS1LQ765P7 747 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 BHLHA9Q7RTU4 235 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 TMEM110Q86TL2 294 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 SCUBE3Q8IX30 993 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 CPA5Q8WXQ8 436 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 RPP25Q9BUL9 199 aaKnown RBP18.06■□□□□ 0.48
CLN6-218ENST00000637223 NUCKS1Q9H1E3 243 aaKnown RBP18.06■□□□□ 0.48
CLN6-218ENST00000637223 HAUS4Q9H6D7 363 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 KCNK12Q9HB15 430 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 FAM86C1Q9NVL1 165 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 ZMYM5Q9UJ78 669 aa18.06■□□□□ 0.48
CLN6-218ENST00000637223 PATJQ8NI35 1801 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 TMEM221A6NGB7 291 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 YJEFN3A6XGL0 299 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 SOBPA7XYQ1 873 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 E7ENQ6 273 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 M0R296 226 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 PAPSS1O43252 624 aaPredicted RBP18.05■□□□□ 0.48
CLN6-218ENST00000637223 COCHO43405 550 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 TLR5O60602 858 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 FBXO21O94952 628 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 ERBB2P04626 1255 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 TPM1P09493 284 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 RARGP13631 454 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 NOMO3P69849 1222 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 FOXK2Q01167 660 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 KLHL30Q0D2K2 578 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 TRIM67Q6ZTA4 783 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 SUGP1Q8IWZ8 645 aaKnown RBP18.05■□□□□ 0.48
CLN6-218ENST00000637223 ARHGAP18Q8N392 663 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 TTC16Q8NEE8 873 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 IPO4Q8TEX9 1081 aaKnown RBP18.05■□□□□ 0.48
CLN6-218ENST00000637223 USP13Q92995 863 aaPredicted RBP18.05■□□□□ 0.48
CLN6-218ENST00000637223 RSPRY1Q96DX4 576 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 MRFAP1L1Q96HT8 127 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 PLA2G2FQ9BZM2 168 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 NACA2Q9H009 215 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 RNF38Q9H0F5 515 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 SYNCQ9H7C4 482 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 ZFP14Q9HCL3 533 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 CYLDQ9NQC7 956 aa18.05■□□□□ 0.48
CLN6-218ENST00000637223 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms