RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 TRIM49BA6NDI0 452 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 GOLGA6L9A6NEM1 432 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 FGFR1OPO95684 399 aaKnown RBP13.39□□□□□ -0.27
CTSD-208ENST00000636843 PDGFRBP09619 1106 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 ANXA13P27216 316 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 GRIK1P39086 918 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 PPP3CCP48454 512 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 PSMC1P62191 440 aaKnown RBP13.39□□□□□ -0.27
CTSD-208ENST00000636843 DMC1Q14565 340 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 ELF2Q15723 593 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 PLK5Q496M5 336 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 DENND5BQ6ZUT9 1274 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 TRAPPC11Q7Z392 1133 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 GUF1Q8N442 669 aaKnown RBP13.39□□□□□ -0.27
CTSD-208ENST00000636843 MYCBPAPQ8TBZ2 947 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 EZH1Q92800 747 aaPredicted RBP13.39□□□□□ -0.27
CTSD-208ENST00000636843 PPP1R13BQ96KQ4 1090 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 MMS19Q96T76 1030 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 POLR3BQ9NW08 1133 aaPredicted RBP13.39□□□□□ -0.27
CTSD-208ENST00000636843 TRMT1Q9NXH9 659 aaKnown RBP13.39□□□□□ -0.27
CTSD-208ENST00000636843 CNOT1A5YKK6 2376 aaKnown RBP13.39□□□□□ -0.27
CTSD-208ENST00000636843 OBSL1O75147 1896 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 ATG2BQ96BY7 2078 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 A0A1W2PQC6 194 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 TM4SF5O14894 197 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 TRIM66O15016 1216 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 TACC1O75410 805 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 RHOBTB1O94844 696 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 GNL1P36915 607 aaPredicted RBP13.39□□□□□ -0.27
CTSD-208ENST00000636843 MPLP40238 635 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 PMS1P54277 932 aaKnown RBP13.39□□□□□ -0.27
CTSD-208ENST00000636843 ADKP55263 362 aaKnown RBP13.39□□□□□ -0.27
CTSD-208ENST00000636843 SNRPFP62306 86 aaKnown RBP13.39□□□□□ -0.27
CTSD-208ENST00000636843 CYP27A1Q02318 531 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 EHHADHQ08426 723 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 CCDC6Q16204 474 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 IRF2BP1Q8IU81 584 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 KIAA0895Q8NCT3 520 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 GLIS3Q8NEA6 775 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 ZNF507Q8TCN5 953 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 C8orf48Q96LL4 319 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 FNBP1Q96RU3 617 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 DUSP9Q99956 384 aaKnown RBP13.39□□□□□ -0.27
CTSD-208ENST00000636843 VPS16Q9H269 839 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 LINC00597Q9H2U6 94 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 SNX25Q9H3E2 840 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 VPS45Q9NRW7 570 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 TAB2Q9NYJ8 693 aa13.39□□□□□ -0.27
CTSD-208ENST00000636843 LGALS16A8MUM7 142 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 LEFTY2O00292 366 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 MFAP3LO75121 409 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 TNNI1P19237 187 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 HOXD13P35453 343 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 NOP14P78316 857 aaKnown RBP13.38□□□□□ -0.27
CTSD-208ENST00000636843 SLC7A9P82251 487 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 LRRC63Q05C16 580 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 SNRNP35Q16560 246 aaKnown RBP13.38□□□□□ -0.27
CTSD-208ENST00000636843 STPG1Q5TH74 334 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 ANKRD40Q6AI12 368 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 EPM2AIP1Q7L775 607 aaPredicted RBP13.38□□□□□ -0.27
CTSD-208ENST00000636843 C11orf74Q86VG3 221 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 KIF18AQ8NI77 898 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 HPS3Q969F9 1004 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 PCED1BQ96HM7 432 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 CGRRF1Q99675 332 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 DUSP15Q9H1R2 295 aaPredicted RBP13.38□□□□□ -0.27
CTSD-208ENST00000636843 SLC39A2Q9NP94 309 aa13.38□□□□□ -0.27
CTSD-208ENST00000636843 GREB1Q4ZG55 1949 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 UBE4BO95155 1302 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 ZNF840PA6NDX5 716 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 SLC9A3R1O14745 358 aaPredicted RBP13.37□□□□□ -0.27
CTSD-208ENST00000636843 KIF20AO95235 890 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 CST3P01034 146 aaPredicted RBP13.37□□□□□ -0.27
CTSD-208ENST00000636843 DLATP10515 647 aaKnown RBP13.37□□□□□ -0.27
CTSD-208ENST00000636843 OPRD1P41143 372 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 USP46P62068 366 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 UBXN1Q04323 297 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 CYP24A1Q07973 514 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 GOLGA8FQ08AF8 430 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 GOLGA8DPQ0D2H9 430 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 PSMD6Q15008 389 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 MDH1BQ5I0G3 518 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 FAM26FQ5R3K3 315 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 TSTD1Q8NFU3 115 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 USP33Q8TEY7 942 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 TSG101Q99816 390 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 MRPL45Q9BRJ2 306 aaKnown RBP13.37□□□□□ -0.27
CTSD-208ENST00000636843 AGPAT3Q9NRZ7 376 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 RXFP3Q9NSD7 469 aa13.37□□□□□ -0.27
CTSD-208ENST00000636843 F8VP50 259 aa13.36□□□□□ -0.27
CTSD-208ENST00000636843 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
CTSD-208ENST00000636843 TGFB1I1O43294 461 aa13.36□□□□□ -0.27
CTSD-208ENST00000636843 STAU1O95793 577 aaKnown RBP13.36□□□□□ -0.27
CTSD-208ENST00000636843 PTPN1P18031 435 aaKnown RBP13.36□□□□□ -0.27
CTSD-208ENST00000636843 KCNA4P22459 653 aa13.36□□□□□ -0.27
CTSD-208ENST00000636843 FECHP22830 423 aa13.36□□□□□ -0.27
CTSD-208ENST00000636843 DGKEP52429 567 aa13.36□□□□□ -0.27
CTSD-208ENST00000636843 TNNC1P63316 161 aa13.36□□□□□ -0.27
CTSD-208ENST00000636843 ZXDBP98169 803 aa13.36□□□□□ -0.27
CTSD-208ENST00000636843 WDR72Q3MJ13 1102 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms