RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 FAM227BQ96M60 508 aa5□□□□□ -1.61
CLN5-212ENST00000636602 PPM1MQ96MI6 270 aa5□□□□□ -1.61
CLN5-212ENST00000636602 MED15Q96RN5 788 aa5□□□□□ -1.61
CLN5-212ENST00000636602 MLST8Q9BVC4 326 aa5□□□□□ -1.61
CLN5-212ENST00000636602 PTDSS2Q9BVG9 487 aa5□□□□□ -1.61
CLN5-212ENST00000636602 GPR87Q9BY21 358 aa5□□□□□ -1.61
CLN5-212ENST00000636602 PABPC3Q9H361 631 aaKnown RBP5□□□□□ -1.61
CLN5-212ENST00000636602 TP63Q9H3D4 680 aaPredicted RBP5□□□□□ -1.61
CLN5-212ENST00000636602 TAF1DQ9H5J8 278 aaPredicted RBP5□□□□□ -1.61
CLN5-212ENST00000636602 CXorf36Q9H7Y0 433 aa5□□□□□ -1.61
CLN5-212ENST00000636602 GBA2Q9HCG7 927 aaPredicted RBP5□□□□□ -1.61
CLN5-212ENST00000636602 SEPSECSQ9HD40 501 aaKnown RBP5□□□□□ -1.61
CLN5-212ENST00000636602 HELLSQ9NRZ9 838 aa5□□□□□ -1.61
CLN5-212ENST00000636602 MAP3K20Q9NYL2 800 aaKnown RBP5□□□□□ -1.61
CLN5-212ENST00000636602 RNF181Q9P0P0 153 aa5□□□□□ -1.61
CLN5-212ENST00000636602 CTTNBP2NLQ9P2B4 639 aa5□□□□□ -1.61
CLN5-212ENST00000636602 IFT80Q9P2H3 777 aaPredicted RBP5□□□□□ -1.61
CLN5-212ENST00000636602 EIF2B4Q9UI10 523 aaKnown RBP5□□□□□ -1.61
CLN5-212ENST00000636602 ZBTB32Q9Y2Y4 487 aaPredicted RBP5□□□□□ -1.61
CLN5-212ENST00000636602 COX11Q9Y6N1 276 aa5□□□□□ -1.61
CLN5-212ENST00000636602 B9A039 149 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 EYA2O00167 538 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 ZNF185O15231 689 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 ZSCAN9O15535 394 aaPredicted RBP4.99□□□□□ -1.61
CLN5-212ENST00000636602 FAM20BO75063 409 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 NTSR2O95665 410 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 ARP10275 920 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 HGFP14210 728 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 TNFAIP3P21580 790 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 SLC5A2P31639 672 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 AKT1P31749 480 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 ADD2P35612 726 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 MAN2A2P49641 1150 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 PAPOLAP51003 745 aaKnown RBP4.99□□□□□ -1.61
CLN5-212ENST00000636602 RABGGTBP53611 331 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 PRKAA2P54646 552 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 BCAT1P54687 386 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 OCA2Q04671 838 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 SCAPQ12770 1279 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 G3BP1Q13283 466 aaKnown RBP eCLIP4.99□□□□□ -1.61
CLN5-212ENST00000636602 INTS11Q5TA45 600 aaKnown RBP4.99□□□□□ -1.61
CLN5-212ENST00000636602 ABLIM2Q6H8Q1 611 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 CLNKQ7Z7G1 428 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 SLC44A2Q8IWA5 706 aaPredicted RBP4.99□□□□□ -1.61
CLN5-212ENST00000636602 SLC15A3Q8IY34 581 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 NRSN1Q8IZ57 195 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.99□□□□□ -1.61
CLN5-212ENST00000636602 SCAMP5Q8TAC9 235 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 AFG1LQ8WV93 481 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 TMEM171Q8WVE6 324 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 ASB12Q8WXK4 309 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 SEC62Q99442 399 aaKnown RBP4.99□□□□□ -1.61
CLN5-212ENST00000636602 MNTQ99583 582 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 TMX4Q9H1E5 349 aaPredicted RBP4.99□□□□□ -1.61
CLN5-212ENST00000636602 RIC8AQ9NPQ8 531 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 PRDM8Q9NQV8 689 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 GGA3Q9NZ52 723 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 DNAJB11Q9UBS4 358 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 LPAR3Q9UBY5 353 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 FEM1BQ9UK73 627 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 FBXO9Q9UK97 447 aaPredicted RBP4.99□□□□□ -1.61
CLN5-212ENST00000636602 NDRG4Q9ULP0 352 aaKnown RBP4.99□□□□□ -1.61
CLN5-212ENST00000636602 NEU2Q9Y3R4 380 aa4.99□□□□□ -1.61
CLN5-212ENST00000636602 GOLGA6L6A8MZA4 724 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 E7ENX8 843 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 F5H697 171 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 J3KTA2 159 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 KIAA0355O15063 1070 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 CD3EAPO15446 510 aaKnown RBP4.98□□□□□ -1.61
CLN5-212ENST00000636602 FAM155BO75949 473 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 YY1P25490 414 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 KLRK1P26718 216 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 CD6P30203 668 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 PPIFP30405 207 aaKnown RBP4.98□□□□□ -1.61
CLN5-212ENST00000636602 PRKAR1BP31321 381 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 NDUFV1P49821 464 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 ANXA11P50995 505 aaKnown RBP4.98□□□□□ -1.61
CLN5-212ENST00000636602 PGDP52209 483 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 TAP2Q03519 686 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 CUL4BQ13620 913 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 ATP1A4Q13733 1029 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 E2F2Q14209 437 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 PTPAQ15257 358 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 FAM110CQ1W6H9 321 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 NAIF1Q69YI7 327 aaPredicted RBP4.98□□□□□ -1.61
CLN5-212ENST00000636602 RINT1Q6NUQ1 792 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 MICALCLQ6ZW33 695 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 RSRC2Q7L4I2 434 aaKnown RBP4.98□□□□□ -1.61
CLN5-212ENST00000636602 MAPKAPK5Q8IW41 473 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 ESX1Q8N693 406 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 ABHD5Q8WTS1 349 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 THAP4Q8WY91 577 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 ZNF668Q96K58 619 aaPredicted RBP4.98□□□□□ -1.61
CLN5-212ENST00000636602 TRAPPC9Q96Q05 1148 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 TRIM5Q9C035 493 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 TOR3AQ9H497 397 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 COL4A3Q01955 1670 aa4.98□□□□□ -1.61
CLN5-212ENST00000636602 XDHP47989 1333 aa4.97□□□□□ -1.61
CLN5-212ENST00000636602 PRAMEF33A0A0G2JMD5 474 aa4.97□□□□□ -1.61
CLN5-212ENST00000636602 PNMA6EA0A0J9YXQ4 647 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms