RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 PIAS3Q9Y6X2 628 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ZZEF1O43149 2961 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 FIGNL2A6NMB9 653 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 J3QW42 95 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 NRG2O14511 850 aaPredicted RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 EDN1P05305 212 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 CDC25AP30304 524 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 PRKCQQ04759 706 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 PCBP1Q15365 356 aaKnown RBP eCLIP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 CTXN3Q4LDR2 81 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 FAM78AQ5JUQ0 283 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF397Q8NF99 534 aaPredicted RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 HDAC7Q8WUI4 952 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 NINJ1Q92982 152 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ZFYVE19Q96K21 471 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 CLUHP3Q96NS8 147 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 NACC1Q96RE7 527 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 FERD3LQ96RJ6 166 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ADAM19Q9H013 955 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ZSCAN32Q9NX65 697 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 FAM53CQ9NYF3 392 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 DLL3Q9NYJ7 618 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 NAGPAQ9UK23 515 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 PPP2R2CQ9Y2T4 447 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 CELSR3Q9NYQ7 3312 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 SPAG17Q6Q759 2223 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 ITIH6Q6UXX5 1313 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 RALGAPA1Q6GYQ0 2036 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 WDR27A2RRH5 827 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 ACKR2O00590 384 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 OR4Q2P0C623 313 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 PTPN2P17706 415 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 CASP1P29466 404 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 CCR2P41597 374 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 TBX4P57082 545 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 SOX4Q06945 474 aaPredicted RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 SIM2Q14190 667 aaPredicted RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 SCARA3Q6AZY7 606 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 LRRN4CLQ8ND94 238 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 ERMNQ8TAM6 284 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 C18orf25Q96B23 403 aaPredicted RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF512Q96ME7 567 aaPredicted RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 PANX2Q96RD6 677 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 PLIN2Q99541 437 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 BAG1Q99933 345 aaPredicted RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 TARS2Q9BW92 718 aaKnown RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 CLEC4MQ9H2X3 399 aaPredicted RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 ATP8A1Q9Y2Q0 1164 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 ZFP37Q9Y6Q3 630 aaPredicted RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 TDRD15B5MCY1 1934 aaKnown RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 ABCA7Q8IZY2 2146 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 SMIM28A0A1B0GU29 152 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 GOLGA6L9A6NEM1 432 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 CHURC1-FNTBB4DL54 471 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 PODXLO00592 558 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 ZSCAN12O43309 604 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 SPATA31C1P0DKV0 1188 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 H2AFXP16104 143 aaPredicted RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 LONP1P36776 959 aaKnown RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 AFMP43652 599 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 FNTBP49356 437 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 TWF1Q12792 350 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 ELF2Q15723 593 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 PPM1JQ5JR12 505 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 Q6ZS52 159 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 SULF2Q8IWU5 870 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 AFAP1L2Q8N4X5 818 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 IQUBQ8NA54 791 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 ZSCAN18Q8TBC5 510 aaPredicted RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 FAM3CQ92520 227 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 ZSWIM3Q96MP5 696 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 C2orf40Q9H1Z8 148 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 FZD8Q9H461 694 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 PARD6AQ9NPB6 346 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 TOPORSQ9NS56 1045 aaPredicted RBP5.18□□□□□ -1.58
LINC00550-201ENST00000629293 MTRRQ9UBK8 725 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 PCDHGA2Q9Y5H1 932 aa5.18□□□□□ -1.58
LINC00550-201ENST00000629293 SLC35F4A4IF30 521 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 LRRC10BA6NIK2 292 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF263O14978 683 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 SOAT2O75908 522 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 SEC24AO95486 1093 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 IMPDH2P12268 514 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 CD33P20138 364 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 IFRD2Q12894 506 aaPredicted RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 PPP2R5AQ15172 486 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 TAF12Q16514 161 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 HSP90AA4PQ58FG1 418 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 FBXO38Q6PIJ6 1188 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 TOGARAM2Q6ZUX3 1019 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 USP37Q86T82 979 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF461Q8TAF7 563 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 IRF7Q92985 503 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 BICD1Q96G01 975 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ABHD17AQ96GS6 310 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 ZBTB45Q96K62 511 aaPredicted RBP5.17□□□□□ -1.58
LINC00550-201ENST00000629293 EXOC2Q96KP1 924 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 NELL2Q99435 816 aa5.17□□□□□ -1.58
LINC00550-201ENST00000629293 SMOC1Q9H4F8 434 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms