RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 C2orf74A8MZ97 194 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 TMEM114B3SHH9 223 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 B8ZZF3 427 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 H7C1Q1 480 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 TREHO43280 583 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PSIP1O75475 530 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 IFNA16P05015 189 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ITGB1P05556 798 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 POLBP06746 335 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 GLI1P08151 1106 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 WEE2P0C1S8 567 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 LINGO3P0C6S8 592 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 FDPSP14324 419 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PDE6AP16499 860 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 FXR1P51114 621 aaKnown RBP eCLIP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SULT2A1Q06520 285 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 MADCAM1Q13477 382 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CLCA4Q14CN2 919 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SSX2Q16385 188 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 HES5Q5TA89 166 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 RETSATQ6NUM9 610 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 DTX3Q8N9I9 347 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 TC2NQ8N9U0 490 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 AENQ8WTP8 325 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 UBLCP1Q8WVY7 318 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 TUBGCP2Q9BSJ2 902 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 B3GNT4Q9C0J1 378 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CDH19Q9H159 772 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PPARGC1AQ9UBK2 798 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PSME2Q9UL46 239 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SAR1BQ9Y6B6 198 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SESN1Q9Y6P5 492 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PRR23AA6NEV1 266 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PER2O15055 1255 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC25A17O43808 307 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ECE2O60344 883 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PPP6R2O75170 966 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PEX11AO75192 247 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 TRIM16O95361 564 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 FGRP09769 529 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 DBTP11182 482 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CTRB1P17538 263 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CSTF2P33240 577 aaKnown RBP eCLIP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CLK3P49761 638 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 HNMTP50135 292 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 BCAMP50895 628 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 VAV2P52735 878 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ATP12AP54707 1039 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC26A5P58743 744 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PURAQ00577 322 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SERINC3Q13530 473 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SPIDRQ14159 915 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 TCEA2Q15560 299 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CTRB2Q6GPI1 263 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PAPD4Q6PIY7 484 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 TAS2R42Q7RTR8 314 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 EFHBQ8N7U6 833 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ATAD1Q8NBU5 361 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 GANCQ8TET4 914 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SCFD2Q8WU76 684 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 HPS1Q92902 700 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ITPKCQ96DU7 683 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC39A13Q96H72 371 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 DNAJC1Q96KC8 554 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ADAD1Q96M93 576 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PPM1MQ96MI6 270 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PPP1R16BQ96T49 567 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 TBCDQ9BTW9 1192 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 NUP85Q9BW27 656 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PRKD2Q9BZL6 878 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 UNKQ9C0B0 810 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 EHD4Q9H223 541 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 MRPL44Q9H9J2 332 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ZSCAN32Q9NX65 697 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 MPP6Q9NZW5 540 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CTNNAL1Q9UBT7 734 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 VPS51Q9UID3 782 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 LNPEPQ9UIQ6 1025 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 RNF112Q9ULX5 631 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 APOBEC2Q9Y235 224 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 NOX1Q9Y5S8 564 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 MAP3K19Q56UN5 1328 aa4.03□□□□□ -1.77
R3HDM1-220ENST00000628915 SH3TC1Q8TE82 1336 aa4.03□□□□□ -1.77
R3HDM1-220ENST00000628915 LOC100506127A0A0U1RQW1 187 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ANKRD34BA5PLL1 514 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 FADS2P1A8MWK0 482 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 A8MXQ7 604 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CCRL2O00421 344 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PSMA7O14818 248 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PFDN6O15212 129 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 LZTS3O60299 673 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 SNAP29O95721 258 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ZBED1O96006 694 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 ALBP02768 609 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 PLEKP08567 350 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CTSHP09668 335 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 IARSP41252 1262 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 GALK1P51570 392 aa4.02□□□□□ -1.77
R3HDM1-220ENST00000628915 CCNG1P51959 295 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms