RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 COMMD10Q9Y6G5 202 aa7.82□□□□□ -1.16
PKP4-217ENST00000628904 hCG_1818297A0A087WSY0 165 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 KBTBD13C9JR72 458 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 MDM4O15151 490 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 PSTPIP1O43586 416 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 XPOTO43592 962 aaKnown RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 BUD23O43709 281 aaKnown RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 CILPO75339 1184 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 TOP3BO95985 862 aaKnown RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 SP100P23497 879 aaPredicted RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 DNAJB2P25686 324 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 ATP5DP30049 168 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 PHBP35232 272 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 CXCR3P49682 368 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 VCPP55072 806 aaKnown RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 ZNF252P-AS1Q0IIN9 211 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 MAP2K5Q13163 448 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 CLUL1Q15846 466 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 CCDC6Q16204 474 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 FNBP1LQ5T0N5 605 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 KCNT2Q6UVM3 1135 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 KDM7AQ6ZMT4 941 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 KCNV2Q8TDN2 545 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 KAT2BQ92831 832 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 PABPC5Q96DU9 382 aaKnown RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 SGF29Q96ES7 293 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 SENP8Q96LD8 212 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 TBCBQ99426 244 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 FERMT1Q9BQL6 677 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 SYT11Q9BT88 431 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 ZNF518BQ9C0D4 1074 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 UBQLN1Q9UMX0 589 aaKnown RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 TRIM33Q9UPN9 1127 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 BTNL10A8MVZ5 291 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 C9IYK1 514 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 MSI1O43347 362 aaKnown RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 BEST1O76090 585 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 THP07101 528 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 CPB1P15086 417 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 ABCD1P33897 745 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 CPT1AP50416 773 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 GJA9P57773 515 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 IL9RQ01113 521 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 PRKCZQ05513 592 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 TFDP2Q14188 446 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 SETDB1Q15047 1291 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 MFSD14CQ5VZR4 134 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 HFE2Q6ZVN8 426 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 PHF13Q86YI8 300 aaPredicted RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 VPS52Q8N1B4 723 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 SLC25A41Q8N5S1 370 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 CCDC185Q8N715 623 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 ST13P5Q8NFI4 369 aaPredicted RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 KLHL29Q96CT2 875 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 TSPYL2Q9H2G4 693 aaPredicted RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 ZDHHC18Q9NUE0 388 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 SLC27A5Q9Y2P5 690 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 A0A087WUV0 522 aaPredicted RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 SIGLEC16A6NMB1 481 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 PAPSS1O43252 624 aaPredicted RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 CDH16O75309 829 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 PMPCBO75439 489 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 PRKAR2AP13861 404 aaKnown RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 RPA3P35244 121 aaPredicted RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 ATXN3P54252 364 aaPredicted RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 CCL23P55773 120 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 SOWAHAQ2M3V2 549 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 KBTBD12Q3ZCT8 623 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 TADA2BQ86TJ2 420 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 CNPY3Q9BT09 278 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 SPON2Q9BUD6 331 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 OSBPL7Q9BZF2 842 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 KLC2Q9H0B6 622 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 ETNK2Q9NVF9 386 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 FAM53CQ9NYF3 392 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 CPSF2Q9P2I0 782 aaKnown RBP7.81□□□□□ -1.16
PKP4-217ENST00000628904 SFMBT1Q9UHJ3 866 aa7.81□□□□□ -1.16
PKP4-217ENST00000628904 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.81□□□□□ -1.16
PKP4-217ENST00000628904 CFAP69A5D8W1 941 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 B4GALT4O60513 344 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 LPXNO60711 386 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 PQBP1O60828 265 aaKnown RBP7.8□□□□□ -1.16
PKP4-217ENST00000628904 DARSP14868 501 aaKnown RBP7.8□□□□□ -1.16
PKP4-217ENST00000628904 EDNRBP24530 442 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 RGS2P41220 211 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 GPD2P43304 727 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 TPI1P60174 286 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 TMPRSS15P98073 1019 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 PTK7Q13308 1070 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 GEN1Q17RS7 908 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 MSS51Q4VC12 460 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 SYPL2Q5VXT5 272 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 KIAA1841Q6NSI8 718 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 C16orf46Q6P387 395 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 ARRDC4Q8NCT1 418 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 ARMC2Q8NEN0 867 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 SCAMP5Q8TAC9 235 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 MORC4Q8TE76 937 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 RNF139Q8WU17 664 aa7.8□□□□□ -1.16
PKP4-217ENST00000628904 PPM1EQ8WY54 764 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms