RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 PROK1P58294 105 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 TUBA4AP68366 448 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 FOXF2Q12947 444 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 ST3GAL2Q16842 350 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 MANEALQ5VSG8 457 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 CACHD1Q5VU97 1274 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 TRIM72Q6ZMU5 477 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 SRRM1Q8IYB3 904 aaKnown RBP3.64□□□□□ -1.83
CNOT1-223ENST00000628857 GALNT4Q8N4A0 578 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 TERB1Q8NA31 727 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 ADAMTS18Q8TE60 1221 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 VOPP1Q96AW1 172 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 LENG8Q96PV6 779 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-223ENST00000628857 FYTTD1Q96QD9 318 aaKnown RBP3.64□□□□□ -1.83
CNOT1-223ENST00000628857 NAA15Q9BXJ9 866 aaKnown RBP3.64□□□□□ -1.83
CNOT1-223ENST00000628857 MYH16Q9H6N6 1097 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 ADARB2Q9NS39 739 aaKnown RBP3.64□□□□□ -1.83
CNOT1-223ENST00000628857 SERGEFQ9UGK8 458 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 STEAP1Q9UHE8 339 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 ITGB1BP2Q9UKP3 347 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 FNDC1Q4ZHG4 1894 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-223ENST00000628857 OR2W5A6NFC9 320 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 RAB27BO00194 218 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 ADAMTS3O15072 1205 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 MYL1P05976 194 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 MYL4P12829 197 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 FGFR2P21802 821 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 MRPS21P82921 87 aaKnown RBP3.63□□□□□ -1.83
CNOT1-223ENST00000628857 E2F1Q01094 437 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 KCTD20Q7Z5Y7 419 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 LINC01465Q8N7H1 131 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 MBD3L2Q8NHZ7 208 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-223ENST00000628857 TMEM171Q8WVE6 324 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 PRR25Q96S07 402 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 ZNF700Q9H0M5 742 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 ARNT2Q9HBZ2 717 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 HEYLQ9NQ87 328 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-223ENST00000628857 SNX15Q9NRS6 342 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 TMOD4Q9NZQ9 345 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 MGAT4CQ9UBM8 478 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 CCNL1Q9UK58 526 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-223ENST00000628857 FRMD4BQ9Y2L6 1034 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 RIPOR2Q9Y4F9 1068 aa3.63□□□□□ -1.83
CNOT1-223ENST00000628857 PCSK5Q92824 1860 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 CGB1A6NKQ9 187 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 PRRT4C9JH25 899 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 UBE2Q2LH0YL09 131 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 EXOC5O00471 708 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 HNRNPDLO14979 420 aaKnown RBP3.62□□□□□ -1.83
CNOT1-223ENST00000628857 PMM2O15305 246 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 FGF18O76093 207 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 IDEP14735 1019 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 CREB1P16220 341 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 TSHRP16473 764 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 STT3AP46977 705 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 PRIM2P49643 509 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 AK2P54819 239 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 TBX4P57082 545 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 CYP4F2P78329 520 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 SSBP2P81877 361 aaPredicted RBP3.62□□□□□ -1.83
CNOT1-223ENST00000628857 CFHR3Q02985 330 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 GRM1Q13255 1194 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 MRNIPQ6NTE8 343 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 TLDC1Q6P9B6 456 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 USP49Q70CQ1 688 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 BCDIN3DQ7Z5W3 292 aaKnown RBP3.62□□□□□ -1.83
CNOT1-223ENST00000628857 AMIGO2Q86SJ2 522 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 SKAP1Q86WV1 359 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 CCAR1Q8IX12 1150 aaKnown RBP3.62□□□□□ -1.83
CNOT1-223ENST00000628857 PNPLA1Q8N8W4 532 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 CYP2W1Q8TAV3 490 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 ZNF398Q8TD17 642 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 IPO4Q8TEX9 1081 aaKnown RBP3.62□□□□□ -1.83
CNOT1-223ENST00000628857 DPF1Q92782 380 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 VPS50Q96JG6 964 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 ASB2Q96Q27 587 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 HIST1H2AAQ96QV6 131 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 GDF15Q99988 308 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 NUDT22Q9BRQ3 303 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 APOL5Q9BWW9 433 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 NAP1L2Q9ULW6 460 aaPredicted RBP3.62□□□□□ -1.83
CNOT1-223ENST00000628857 HPSEQ9Y251 543 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 TBC1D30Q9Y2I9 924 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 SPATA31A1Q5TZJ5 1347 aa3.62□□□□□ -1.83
CNOT1-223ENST00000628857 TCRBV5S1A1TA0A578 114 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 POM121BA6NF01 834 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 TISP43B9A030 160 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 AP4M1O00189 453 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 CES2O00748 559 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 APAF1O14727 1248 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 SPRY2O43597 315 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 COQ9O75208 318 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 MT-CO3P00414 261 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 TUBB4AP04350 444 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 CELA2AP08217 269 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 NBPF7P0C2Y1 421 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-223ENST00000628857 RBL1P28749 1068 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 DGKQP52824 942 aa3.61□□□□□ -1.83
CNOT1-223ENST00000628857 OS9Q13438 667 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-223ENST00000628857 PICALMQ13492 652 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms