RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	ACAP2	Q15057	778 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	EZH2	Q15910	746 aa	Known RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	ABCB5	Q2M3G0	1257 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	GRAMD1B	Q3KR37	738 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	SLC4A10	Q6U841	1118 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	FIP1L1	Q6UN15	594 aa	Known RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	TTC7B	Q86TV6	843 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	DCLK2	Q8N568	766 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	CCDC26	Q8TAB7	109 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	ANKRD49	Q8WVL7	239 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	HAPLN3	Q96S86	360 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	SH3GL3	Q99963	347 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	CRACR2A	Q9BSW2	395 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	TCHP	Q9BT92	498 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	ZNF304	Q9HCX3	659 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	MAN1C1	Q9NR34	630 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	UBAP1	Q9NZ09	502 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	SERGEF	Q9UGK8	458 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	FBXO2	Q9UK22	296 aa	Predicted RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	TRHDE	Q9UKU6	1024 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	TPCN1	Q9ULQ1	816 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	LRRFIP2	Q9Y608	721 aa	Known RBP	4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	ZNF804B	A4D1E1	1349 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	RNF123	Q5XPI4	1314 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	ZBED9	Q6R2W3	1325 aa		4.16	□□□□□ -1.74
UBE2A-208	ENST00000628734	AKNA	Q7Z591	1439 aa		4.15	□□□□□ -1.74
UBE2A-208	ENST00000628734	PRSS29P	A6NIE9	313 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	PRRT4	C9JH25	899 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	FOXN3	O00409	490 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	GABRD	O14764	452 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	ZSCAN9	O15535	394 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	XPOT	O43592	962 aa	Known RBP	4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	TRIAP1	O43715	76 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	TCEA3	O75764	348 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	BAG4	O95429	457 aa	Known RBP	4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	FGFR1OP	O95684	399 aa	Known RBP	4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	FTH1P19	P0C7X4	201 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	GLUL	P15104	373 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	TOB1	P50616	345 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	EXOSC10	Q01780	885 aa	Known RBP	4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	DEUP1	Q05D60	604 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	SNAPC2	Q13487	334 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	MTMR1	Q13613	665 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	FAM153C	Q494X1	144 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	FAM133B	Q5BKY9	247 aa	Known RBP	4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	SPDYC	Q5MJ68	293 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	SUMO4	Q6EEV6	95 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	CYP26C1	Q6V0L0	522 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	CCDC80	Q76M96	950 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	PPP1R32	Q7Z5V6	425 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	RASAL3	Q86YV0	1011 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	PSD4	Q8NDX1	1056 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	VRK1	Q99986	396 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	CNPPD1	Q9BV87	410 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	ADGRE3	Q9BY15	652 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	SEMA4C	Q9C0C4	833 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	AMBRA1	Q9C0C7	1298 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	BRD9	Q9H8M2	597 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	TMEM165	Q9HC07	324 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	SH3GLB2	Q9NR46	395 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	SERTAD4	Q9NUC0	356 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	TYW1	Q9NV66	732 aa	Known RBP	4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	EHD3	Q9NZN3	535 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	CFAP97	Q9P2B7	532 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	ZNF69	Q9UC07	566 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	PGAP2	Q9UHJ9	254 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	PADI4	Q9UM07	663 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	ST3GAL5	Q9UNP4	418 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	JRKL	Q9Y4A0	524 aa		4.15	□□□□□ -1.75
UBE2A-208	ENST00000628734	UQCRHL	A0A096LP55	91 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	EIF3F	O00303	357 aa	Predicted RBP	4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	CPLX1	O14810	134 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	SMC2	O95347	1197 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	UQCRH	P07919	91 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	GJB1	P08034	283 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	GNAI3	P08754	354 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	ZFX	P17010	805 aa	Predicted RBP	4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	MAP2K2	P36507	400 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	CCT8	P50990	548 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	GNAI1	P63096	354 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	MRPL28	Q13084	256 aa	Known RBP	4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	HABP2	Q14520	560 aa	Predicted RBP	4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	KIF22	Q14807	665 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	ARHGEF6	Q15052	776 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	POSTN	Q15063	836 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	RASA2	Q15283	850 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	LRRC41	Q15345	812 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	KHDC1	Q4VXA5	237 aa	Known RBP	4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	ALF	Q53S48	1182 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	WDR45B	Q5MNZ6	344 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	C10orf76	Q5T2E6	689 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	TTLL5	Q6EMB2	1281 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	TAF2	Q6P1X5	1199 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	SRL	Q86TD4	932 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	FAM90A1	Q86YD7	464 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	PEX5L	Q8IYB4	626 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	SLC7A5P1	Q8MH63	180 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms