RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 SHISA7A6NL88 538 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 PI15O43692 258 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 MFAP3LO75121 409 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 ADCY5O95622 1261 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 LSM8O95777 96 aaKnown RBP15.48■□□□□ 0.07
PNKP-221ENST00000627317 AOC1P19801 751 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 GPD2P43304 727 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 KIF11P52732 1056 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 NUBP1P53384 320 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 KLHL30Q0D2K2 578 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 ADIGQ0VDE8 80 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 TAF10Q12962 218 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 PDCLQ13371 301 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 TSR1Q2NL82 804 aaKnown RBP15.48■□□□□ 0.07
PNKP-221ENST00000627317 ARHGAP15Q53QZ3 475 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 TDRD12Q587J7 1177 aaKnown RBP15.48■□□□□ 0.07
PNKP-221ENST00000627317 E4F1Q66K89 784 aaPredicted RBP15.48■□□□□ 0.07
PNKP-221ENST00000627317 TRIM72Q6ZMU5 477 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 IRF2BP2Q7Z5L9 587 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 DRC7Q8IY82 874 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 C1orf131Q8NDD1 294 aaKnown RBP15.48■□□□□ 0.07
PNKP-221ENST00000627317 PDZD8Q8NEN9 1154 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 SLC35F5Q8WV83 523 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 MRPS31Q92665 395 aaKnown RBP15.48■□□□□ 0.07
PNKP-221ENST00000627317 SYN2Q92777 582 aaPredicted RBP15.48■□□□□ 0.07
PNKP-221ENST00000627317 HSFY1Q96LI6 401 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 DDX23Q9BUQ8 820 aaKnown RBP15.48■□□□□ 0.07
PNKP-221ENST00000627317 ATXN3LQ9H3M9 355 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 SLITRK6Q9H5Y7 841 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 TRPM5Q9NZQ8 1165 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 CA14Q9ULX7 337 aa15.48■□□□□ 0.07
PNKP-221ENST00000627317 DMDP11532 3685 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 LCP1P13796 627 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 PRKCIP41743 596 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 ACADSBP45954 432 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 TKTL1P51854 596 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 CYP4F8P98187 520 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 FMO1Q01740 532 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 NHLH1Q02575 133 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 PMF1Q6P1K2 205 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 VITQ6UXI7 678 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 CNGA4Q8IV77 575 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 MSANTD4Q8NCY6 345 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 ZSCAN18Q8TBC5 510 aaPredicted RBP15.47■□□□□ 0.07
PNKP-221ENST00000627317 IPO4Q8TEX9 1081 aaKnown RBP15.47■□□□□ 0.07
PNKP-221ENST00000627317 STK32AQ8WU08 396 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 KCTD13Q8WZ19 329 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 OVCA2Q8WZ82 227 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 AGPAT1Q99943 283 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 ULBP1Q9BZM6 244 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 SYNCQ9H7C4 482 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 TBC1D17Q9HA65 648 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 GRPEL1Q9HAV7 217 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 ZNHIT6Q9NWK9 470 aaKnown RBP15.47■□□□□ 0.07
PNKP-221ENST00000627317 IL37Q9NZH6 218 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 GMIPQ9P107 970 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 SCML2Q9UQR0 700 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 MYO16Q9Y6X6 1858 aa15.47■□□□□ 0.07
PNKP-221ENST00000627317 ZNF638Q14966 1978 aaKnown RBP15.46■□□□□ 0.07
PNKP-221ENST00000627317 AKR1B15C9JRZ8 316 aaPredicted RBP15.46■□□□□ 0.07
PNKP-221ENST00000627317 ARNTLO00327 626 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 PIK3R2O00459 728 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 GALR2O43603 387 aaPredicted RBP15.46■□□□□ 0.07
PNKP-221ENST00000627317 TADA3O75528 432 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 ABL1P00519 1130 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 F11P03951 625 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 CHRNB2P17787 502 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 WEE1P30291 646 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 CDC25BP30305 580 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 VIPR2P41587 438 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 PPP3CCP48454 512 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 STARD6P59095 220 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 TBX2Q13207 712 aaPredicted RBP15.46■□□□□ 0.07
PNKP-221ENST00000627317 RAB41Q5JT25 222 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 NAA35Q5VZE5 725 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 CCDC186Q7Z3E2 898 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 FLCNQ8NFG4 579 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 OR8K1Q8NGG5 319 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 FAM122AQ96E09 287 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 PRRX2Q99811 253 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 MFSD1Q9H3U5 465 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 HAUS4Q9H6D7 363 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 ZFP14Q9HCL3 533 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 CYLDQ9NQC7 956 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 DLGAP2Q9P1A6 1054 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 CYTH4Q9UIA0 394 aa15.46■□□□□ 0.07
PNKP-221ENST00000627317 BZW2Q9Y6E2 419 aaKnown RBP15.46■□□□□ 0.07
PNKP-221ENST00000627317 VPS13AQ96RL7 3174 aa15.46■□□□□ 0.06
PNKP-221ENST00000627317 FAM92AA1XBS5 289 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 FBXO21O94952 628 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 ZBED1O96006 694 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 SERPING1P05155 500 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 USP17L7P0C7H9 530 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 SKILP12757 684 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 TNFAIP3P21580 790 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 DDX6P26196 483 aaKnown RBP eCLIP15.45■□□□□ 0.06
PNKP-221ENST00000627317 CDH5P33151 784 aaPredicted RBP15.45■□□□□ 0.06
PNKP-221ENST00000627317 SNX16P57768 344 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 NOMO3P69849 1222 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 GOLGA8FQ08AF8 430 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms