RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 MBL2P11226 248 aaPredicted RBP14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 BRD2P25440 801 aaKnown RBP14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 IFNAR2P48551 515 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 TKTL1P51854 596 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 UBXN1Q04323 297 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 RAPGEF1Q13905 1077 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 ZNF77Q15935 545 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 ITPRIPL2Q3MIP1 535 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 ASTLQ6HA08 431 aaPredicted RBP14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 POTEHQ6S545 545 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 ZNF852Q6ZMS4 543 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 HFE2Q6ZVN8 426 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 RALGPS2Q86X27 583 aaPredicted RBP14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 FAM71AQ8IYT1 594 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 CPA6Q8N4T0 437 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 SLC35F5Q8WV83 523 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 ZNF606Q8WXB4 792 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 TFAP2BQ92481 460 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 PCMTD1Q96MG8 357 aaPredicted RBP14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 IER2Q9BTL4 223 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 LSM14BQ9BX40 385 aaKnown RBP14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 NAGPAQ9UK23 515 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 STRIP2Q9ULQ0 834 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 CA14Q9ULX7 337 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 PCDHGC3Q9UN70 934 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 KANSL1LA0AUZ9 987 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 E2F8A0AVK6 867 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 FAM86C2PA6NEL3 165 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 RNF225M0QZC1 329 aaPredicted RBP14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 ARNTLO00327 626 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 STK25O00506 426 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 NFATC1O95644 943 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 CCDC172P0C7W6 258 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 AOC1P19801 751 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 COL9A1P20849 921 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 KRT9P35527 623 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 KPNA1P52294 538 aaPredicted RBP14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 KCNMA1Q12791 1236 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 GPRIN1Q7Z2K8 1008 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 DHX40Q8IX18 779 aaKnown RBP14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 MSANTD4Q8NCY6 345 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 NEK11Q8NG66 645 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 SH3RF2Q8TEC5 729 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 OSCP1Q8WVF1 389 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 SECISBP2LQ93073 1101 aaKnown RBP14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 SPAG5Q96R06 1193 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 FAM83CQ9BQN1 747 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 DDX23Q9BUQ8 820 aaKnown RBP14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 MIS12Q9H081 205 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 IRF2BPLQ9H1B7 796 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 LHX5Q9H2C1 402 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 SMOC2Q9H3U7 446 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 TBC1D17Q9HA65 648 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 CHORDC1Q9UHD1 332 aaPredicted RBP14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 DNMT3LQ9UJW3 386 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 LSM7Q9UK45 103 aaKnown RBP14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 CPQQ9Y646 472 aa14.72□□□□□ -0.05
SNRPA1-216ENST00000626000 LEFTY2O00292 366 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 CYP26A1O43174 497 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 COCHO43405 550 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 TPM3P06753 285 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 YWHAGP61981 247 aaKnown RBP eCLIP14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 COG7P83436 770 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 ADIGQ0VDE8 80 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 DRAP1Q14919 205 aaPredicted RBP14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 SYCP1Q15431 976 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 GJB7Q6PEY0 223 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 TPRG1Q6ZUI0 275 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 RSRC2Q7L4I2 434 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 ZNF677Q86XU0 584 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 FLCNQ8NFG4 579 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 CCDC26Q8TAB7 109 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 UBA3Q8TBC4 463 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 RNF139Q8WU17 664 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 RSPRY1Q96DX4 576 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 IQCDQ96DY2 449 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 SLC22A12Q96S37 553 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 CYP2S1Q96SQ9 504 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 NAA15Q9BXJ9 866 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 SMG9Q9H0W8 520 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 GKN1Q9NS71 199 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 ABCC13Q9NSE7 274 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 TMEM51Q9NW97 253 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 DUS2Q9NX74 493 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 CCL26Q9Y258 94 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 ZNF510Q9Y2H8 683 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 SH3BP1Q9Y3L3 701 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 SIT1Q9Y3P8 196 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 PIAS3Q9Y6X2 628 aa14.71□□□□□ -0.05
SNRPA1-216ENST00000626000 TRIOO75962 3097 aa14.7□□□□□ -0.06
SNRPA1-216ENST00000626000 KRBA1A5PL33 1030 aa14.7□□□□□ -0.06
SNRPA1-216ENST00000626000 F8VZ95 297 aa14.7□□□□□ -0.06
SNRPA1-216ENST00000626000 FOXN3O00409 490 aaPredicted RBP14.7□□□□□ -0.06
SNRPA1-216ENST00000626000 LSM8O95777 96 aaKnown RBP14.7□□□□□ -0.06
SNRPA1-216ENST00000626000 SERPINC1P01008 464 aa14.7□□□□□ -0.06
SNRPA1-216ENST00000626000 RARGP13631 454 aa14.7□□□□□ -0.06
SNRPA1-216ENST00000626000 GPD2P43304 727 aa14.7□□□□□ -0.06
SNRPA1-216ENST00000626000 RPL34P49207 117 aaKnown RBP14.7□□□□□ -0.06
SNRPA1-216ENST00000626000 RUNX3Q13761 415 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms