RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 SH3RF3Q8TEJ3 882 aaPredicted RBP3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 ATRIPQ8WXE1 791 aa3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 GRAMD1AQ96CP6 724 aa3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 LTV1Q96GA3 475 aaPredicted RBP3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 Q96MF0 132 aa3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 PRR25Q96S07 402 aa3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 AIFM2Q9BRQ8 373 aa3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 PABPC3Q9H361 631 aaKnown RBP3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 GLOD4Q9HC38 313 aa3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 VPS45Q9NRW7 570 aa3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 TBCCD1Q9NVR7 557 aa3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 RRN3Q9NYV6 651 aa3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 CA14Q9ULX7 337 aa3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 DAPP1Q9UN19 280 aa3.22□□□□□ -1.89
SCARNA4-202ENST00000625402 KAT6AQ92794 2004 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 PIPSLA2A3N6 862 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 GRID2IPA4D2P6 1211 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 C1QTNF3-AMACRE9PGA6 284 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 M0QZQ0 153 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 EXOC5O00471 708 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 SLC16A3O15427 465 aaKnown RBP3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 CCNT2O60583 730 aaKnown RBP3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 WDR47O94967 919 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 PEX11BO96011 259 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 VIPP01282 170 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 ITGA2BP08514 1039 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 CYP21A2P08686 494 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 ELFN1P0C7U0 828 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 CTGFP29279 349 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 PRKAR1BP31321 381 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 MCM5P33992 734 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 ZEB1P37275 1124 aaPredicted RBP3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 PPM1FP49593 454 aaPredicted RBP3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 SEC24CP53992 1094 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 ALDH18A1P54886 795 aaKnown RBP3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 FAM3BP58499 235 aaPredicted RBP3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 ITIH3Q06033 890 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 PPFIA1Q13136 1202 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 FOXE3Q13461 319 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 TRIM71Q2Q1W2 868 aaKnown RBP3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 SPATS1Q496A3 300 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 PRR16Q569H4 304 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 TMEM196Q5HYL7 178 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 KIAA0895LQ68EN5 471 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 MSANTD2Q6P1R3 559 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 LVRNQ6Q4G3 990 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 KLHL17Q6TDP4 642 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 Q6YL49 198 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 Q6ZPA2 131 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 MOGAT3Q86VF5 341 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 FSTL5Q8N475 847 aaPredicted RBP3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 TFAP2BQ92481 460 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 CTHRC1Q96CG8 243 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 RTKNQ9BST9 563 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 DDX23Q9BUQ8 820 aaKnown RBP3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 INO80BQ9C086 356 aaPredicted RBP3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 CASS4Q9NQ75 786 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 HELLSQ9NRZ9 838 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 SYBUQ9NX95 663 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 TESQ9UGI8 421 aaKnown RBP3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 FEM1BQ9UK73 627 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 ASAP1Q9ULH1 1129 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 GABRQQ9UN88 632 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 LZTS1Q9Y250 596 aa3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 POLR2AP24928 1970 aaKnown RBP3.21□□□□□ -1.9
SCARNA4-202ENST00000625402 SALL3Q9BXA9 1300 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 GXYLT2A0PJZ3 443 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 KIF28PB7ZC32 967 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 TISP43B9A030 160 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 EIF3FO00303 357 aaPredicted RBP3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 NCAM2O15394 837 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 ZSCAN9O15535 394 aaPredicted RBP3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 PPP6R2O75170 966 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 FAM155BO75949 473 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 CER1O95813 267 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 AGR2O95994 175 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 CKMT1AP12532 417 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 DRD1P21728 446 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 CST5P28325 142 aaPredicted RBP3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 PTGS2P35354 604 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 MTHFSP49914 203 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 NXPH1P58417 271 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 PSG6Q00889 435 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 E2F1Q01094 437 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 DEUP1Q05D60 604 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 CUL4BQ13620 913 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 CLCA4Q14CN2 919 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 TRIM60Q495X7 471 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 AASDHQ4L235 1098 aaPredicted RBP3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 HSP90AB4PQ58FF6 505 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 ZNF618Q5T7W0 954 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 TTC22Q5TAA0 569 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 ABHD17BQ5VST6 288 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 FAM90A2PQ658T7 463 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 RFX8Q6ZV50 586 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 RRAGAQ7L523 313 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 PEG10Q86TG7 708 aaKnown RBP3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 ZNF354CQ86Y25 554 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 VRK3Q8IV63 474 aa3.2□□□□□ -1.9
SCARNA4-202ENST00000625402 SMAP1Q8IYB5 467 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms