RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 CFAP57Q96MR6 1250 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 SLITRK1Q96PX8 696 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 HEMGNQ9BXL5 484 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 RHOBTB2Q9BYZ6 727 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 OSBPL8Q9BZF1 889 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 RAB6CQ9H0N0 254 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 LRRC4Q9HBW1 653 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 EPB41L5Q9HCM4 733 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 ARFGAP3Q9NP61 516 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 GDF3Q9NR23 364 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 TMEM30AQ9NV96 361 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.82□□□□□ -0.68
ATRX-216ENST00000624403 PCSK1NQ9UHG2 260 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 AMACRQ9UHK6 382 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 ESYT3A0FGR9 886 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 LRRD1A4D1F6 860 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 C3orf70A6NLC5 250 aaPredicted RBP10.81□□□□□ -0.68
ATRX-216ENST00000624403 HHLA1C9JL84 531 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 NRP1O14786 923 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 TTI1O43156 1089 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 TRUB2O95900 331 aaKnown RBP10.81□□□□□ -0.68
ATRX-216ENST00000624403 KRT7P08729 469 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 MYBL2P10244 700 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 SDC4P31431 198 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 PTPN7P35236 360 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 RFC2P35250 354 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 COILP38432 576 aaPredicted RBP10.81□□□□□ -0.68
ATRX-216ENST00000624403 CETN2P41208 172 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 SLC11A1P49279 550 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 NDUFV1P49821 464 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 TKTL1P51854 596 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 ATP11AP98196 1134 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 TSPY1Q01534 308 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 DR1Q01658 176 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 YWHAHQ04917 246 aaPredicted RBP10.81□□□□□ -0.68
ATRX-216ENST00000624403 KLF1Q13351 362 aaPredicted RBP10.81□□□□□ -0.68
ATRX-216ENST00000624403 SMC1AQ14683 1233 aaKnown RBP10.81□□□□□ -0.68
ATRX-216ENST00000624403 SMTNL2Q2TAL5 461 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 MSS51Q4VC12 460 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 EFHC1Q5JVL4 640 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 CNKSR3Q6P9H4 555 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 MFSD7Q6UXD7 560 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 CYP4V2Q6ZWL3 525 aaPredicted RBP10.81□□□□□ -0.68
ATRX-216ENST00000624403 ARCQ7LC44 396 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 MAATS1Q7Z4T9 603 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 MTERF4Q7Z6M4 381 aaKnown RBP10.81□□□□□ -0.68
ATRX-216ENST00000624403 SIX6OS1Q8N1H7 587 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 C12orf50Q8NA57 414 aaPredicted RBP10.81□□□□□ -0.68
ATRX-216ENST00000624403 FAM172AQ8WUF8 416 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 C1orf54Q8WWF1 131 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 SMARCD1Q96GM5 515 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 PEBP4Q96S96 227 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 KCNK16Q96T55 309 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 COLEC11Q9BWP8 271 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 UBXN6Q9BZV1 441 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 MARCH5Q9NX47 278 aa10.81□□□□□ -0.68
ATRX-216ENST00000624403 R3HDM2Q9Y2K5 976 aaKnown RBP10.81□□□□□ -0.68
ATRX-216ENST00000624403 SCN5AQ14524 2016 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 hCG_1818297A0A087WSY0 165 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 FAM187AA6NFU0 413 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 TRAPPC3O43617 180 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 HSF2BPO75031 334 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 DAB1O75553 588 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 FBXO21O94952 628 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 OAZ2O95190 189 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 ALDH2P05091 517 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 KRT10P13645 584 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 TFE3P19532 575 aaPredicted RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 BDNFP23560 247 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 CDKN2BP42772 138 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 PTPN9P43378 593 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 FNTAP49354 379 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 CARSP49589 748 aaKnown RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 CTCFP49711 727 aaPredicted RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 MRPS5P82675 430 aaKnown RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 DHX34Q14147 1143 aaKnown RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 IKBKEQ14164 716 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 TRADDQ15628 312 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 MAPRE1Q15691 268 aaKnown RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 TAZQ16635 292 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 CDO1Q16878 200 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 KCTD19Q17RG1 926 aaPredicted RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 MAP9Q49MG5 647 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 ODF2Q5BJF6 829 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 RAB41Q5JT25 222 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 KCNT1Q5JUK3 1230 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 GPRIN1Q7Z2K8 1008 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 AENQ8WTP8 325 aaKnown RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 IFT81Q8WYA0 676 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 ATG4AQ8WYN0 398 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 HSPH1Q92598 858 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 RUNDC3BQ96NL0 473 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 USB1Q9BQ65 265 aaKnown RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 TMEM175Q9BSA9 504 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 TRIM51Q9BSJ1 452 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 C11orf84Q9BUA3 381 aaPredicted RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 DDX23Q9BUQ8 820 aaKnown RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 MRPL9Q9BYD2 267 aaKnown RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 ULBP1Q9BZM6 244 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 DCLK3Q9C098 648 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms