RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 RFPL1O75677 317 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 RAB1AP62820 205 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 ZNF91Q05481 1191 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 LARS2Q15031 903 aaKnown RBP5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 PPP2R5AQ15172 486 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 LY6KQ17RY6 165 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 TRIM71Q2Q1W2 868 aaKnown RBP5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 PLA1AQ53H76 456 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 VSTM1Q6UX27 236 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 PIM3Q86V86 326 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 ANKRD13BQ86YJ7 626 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 LIX1LQ8IVB5 337 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 TPH2Q8IWU9 490 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 GRAMD1CQ8IYS0 662 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 PNISRQ8TF01 805 aaKnown RBP5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 MRGPRX1Q96LB2 322 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 ARMT1Q9H993 441 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 NOB1Q9ULX3 412 aaKnown RBP5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 LRP12Q9Y561 859 aa5.27□□□□□ -1.57
AC004943.3-201ENST00000624116 A0A088AWK7 358 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 CCDC187A0A096LP49 1063 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 EIF3JO75822 258 aaKnown RBP5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 ALDH2P05091 517 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 HSPA6P17066 643 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 EPHA3P29320 983 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 THBS3P49746 956 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 BCAT1P54687 386 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 RPS13P62277 151 aaKnown RBP5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 LMAN2Q12907 356 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 RAB32Q13637 225 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 NFE2Q16621 373 aaPredicted RBP5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 ZIK1Q3SY52 487 aaPredicted RBP5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 ATAT1Q5SQI0 421 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 LVRNQ6Q4G3 990 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 C9orf47Q6ZRZ4 202 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 CCDC146Q8IYE0 955 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 C16orf71Q8IYS4 520 aaPredicted RBP5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 NGDNQ8NEJ9 315 aaKnown RBP5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 OR6B3Q8NGW1 331 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 MAP4K1Q92918 833 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 PPP2R3CQ969Q6 453 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 HS6ST2Q96MM7 605 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 USP22Q9UPT9 525 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 DRG1Q9Y295 367 aaKnown RBP5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 TTC3P53804 2025 aa5.26□□□□□ -1.57
AC004943.3-201ENST00000624116 FER1L4A9Z1Z3 1794 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 PRR23D1E9PI22 279 aaPredicted RBP5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 H3BNX3 289 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 EXOC5O00471 708 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 TMPRSS11DO60235 418 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 TLR2O60603 784 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 TULP3O75386 442 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 VNN1O95497 513 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 PRR23D2P0DMB1 279 aaPredicted RBP5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 U2AF1L5P0DN76 240 aaPredicted RBP5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 BDNFP23560 247 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 HOXD9P28356 352 aaPredicted RBP5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 ME1P48163 572 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 COPB1P53618 953 aaKnown RBP5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 RHBDL3P58872 404 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 PSG6Q00889 435 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 U2AF1Q01081 240 aaKnown RBP eCLIP5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 SEMA3AQ14563 771 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 HSP90AB2PQ58FF8 381 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 MEPCEQ7L2J0 689 aaKnown RBP5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 SDR16C5Q8N3Y7 309 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 ARFGAP1Q8N6T3 406 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 CELF5Q8N6W0 485 aaKnown RBP5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 MPLKIPQ8TAP9 179 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 TMEM171Q8WVE6 324 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 AIFM3Q96NN9 605 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 P2RX7Q99572 595 aaKnown RBP5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 ANP32EQ9BTT0 268 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 TRIM54Q9BYV2 358 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 MS4A7Q9GZW8 240 aaPredicted RBP5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 GBA2Q9HCG7 927 aaPredicted RBP5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 NMRK2Q9NPI5 230 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 TRIM36Q9NQ86 728 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 GAR1Q9NY12 217 aaKnown RBP5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 HS3ST3B1Q9Y662 390 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 SQORQ9Y6N5 450 aa5.25□□□□□ -1.57
AC004943.3-201ENST00000624116 A0A1W2PPL8 197 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 BTN3A1O00481 513 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 CNOT3O75175 753 aaKnown RBP5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 WDHD1O75717 1129 aaPredicted RBP5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 SCGB1D2O95969 90 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 ARFIP2P53365 341 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 ZNF267Q14586 743 aaPredicted RBP5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 INSCQ1MX18 579 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 TMTC4Q5T4D3 741 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 DCDC5Q6ZRR9 648 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 DAAM2Q86T65 1068 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 LINC01465Q8N7H1 131 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 SMRP1Q8NCR6 262 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 PLBD2Q8NHP8 589 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 TRMOQ9BU70 441 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 SLC12A5Q9H2X9 1139 aa5.24□□□□□ -1.57
AC004943.3-201ENST00000624116 EPB41L2O43491 1005 aaKnown RBP5.23□□□□□ -1.57
AC004943.3-201ENST00000624116 ZNF500O60304 480 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms