RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 G3V3G9 751 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 CD48P09326 243 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 KDELR1P24390 212 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 IL1R2P27930 398 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 EIF3EP60228 445 aaKnown RBP14.66□□□□□ -0.06
LDB3-209ENST00000623056 RPL26P61254 145 aaKnown RBP14.66□□□□□ -0.06
LDB3-209ENST00000623056 MRPS9P82933 396 aaKnown RBP14.66□□□□□ -0.06
LDB3-209ENST00000623056 FOLH1Q04609 750 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 TUBB3Q13509 450 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 MTMR1Q13613 665 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 BMPR2Q13873 1038 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 DCAF8Q5TAQ9 597 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 CYP4A22Q5TCH4 519 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 PGM2L1Q6PCE3 622 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 RBM44Q6ZP01 1051 aaKnown RBP14.66□□□□□ -0.06
LDB3-209ENST00000623056 ZCCHC23Q6ZST2 131 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 ANO5Q75V66 913 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 TAS1R3Q7RTX0 852 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 RBM12BQ8IXT5 1001 aaKnown RBP14.66□□□□□ -0.06
LDB3-209ENST00000623056 JADE3Q92613 823 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 USP6NLQ92738 828 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 CCDC124Q96CT7 223 aaKnown RBP14.66□□□□□ -0.06
LDB3-209ENST00000623056 PRICKLE1Q96MT3 831 aaPredicted RBP14.66□□□□□ -0.06
LDB3-209ENST00000623056 PNPLA8Q9NP80 782 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 SLX4Q8IY92 1834 aa14.66□□□□□ -0.06
LDB3-209ENST00000623056 ZSCAN9O15535 394 aaPredicted RBP14.65□□□□□ -0.06
LDB3-209ENST00000623056 BPGMP07738 259 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 RAG1P15918 1043 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 TBXAS1P24557 533 aaPredicted RBP14.65□□□□□ -0.06
LDB3-209ENST00000623056 SERPINB6P35237 376 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 ACOT2P49753 483 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 STX3Q13277 289 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 KCNJ11Q14654 390 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 SH2D4BQ5SQS7 431 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 HIPK4Q8NE63 616 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 RAB3IL1Q8TBN0 382 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 TBC1D22BQ9NU19 505 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 MKS1Q9NXB0 559 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 ZNF180Q9UJW8 692 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 TMX2Q9Y320 296 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 GMEB1Q9Y692 573 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 ZNF541Q9H0D2 1346 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 CSDE1O75534 798 aaKnown RBP14.65□□□□□ -0.06
LDB3-209ENST00000623056 CCNE2O96020 404 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 ZNF132P52740 706 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 COPAP53621 1224 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 HPCAP84074 193 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 TAP1Q03518 808 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 TBL3Q12788 808 aaKnown RBP14.65□□□□□ -0.06
LDB3-209ENST00000623056 TAZQ16635 292 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 TMEM259Q4ZIN3 620 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 RABGAP1LQ5R372 815 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 FAM182AQ5T1J6 154 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 B3GNT6Q6ZMB0 384 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 DENND5BQ6ZUT9 1274 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 NCAPG2Q86XI2 1143 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 ARFGAP1Q8N6T3 406 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 ICA1LQ8NDH6 482 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 BTBD9Q96Q07 612 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 APOL6Q9BWW8 343 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 PDGFDQ9GZP0 370 aaPredicted RBP14.65□□□□□ -0.06
LDB3-209ENST00000623056 XAB2Q9HCS7 855 aaKnown RBP14.65□□□□□ -0.06
LDB3-209ENST00000623056 FBXO28Q9NVF7 368 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 SLC9A2Q9UBY0 812 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 CDH22Q9UJ99 828 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 RPS6KL1Q9Y6S9 549 aa14.65□□□□□ -0.06
LDB3-209ENST00000623056 SF3B1O75533 1304 aaKnown RBP eCLIP14.64□□□□□ -0.07
LDB3-209ENST00000623056 hCG_2014768A0A024R1R8 64 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 CASQ2O14958 399 aaPredicted RBP14.64□□□□□ -0.07
LDB3-209ENST00000623056 UGT1A9O60656 530 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 LRCH4O75427 683 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 NPM3O75607 178 aaKnown RBP14.64□□□□□ -0.07
LDB3-209ENST00000623056 LSM8O95777 96 aaKnown RBP14.64□□□□□ -0.07
LDB3-209ENST00000623056 PROCP04070 461 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 KRT7P08729 469 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 RBP3P10745 1247 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 PSMA2P25787 234 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 HMGB2P26583 209 aaKnown RBP14.64□□□□□ -0.07
LDB3-209ENST00000623056 CHRNA5P30532 468 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 RPL5P46777 297 aaKnown RBP14.64□□□□□ -0.07
LDB3-209ENST00000623056 BTKQ06187 659 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 TMC7Q7Z402 723 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 RFX6Q8HWS3 928 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 THNSL1Q8IYQ7 743 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 MASTLQ96GX5 879 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 AGBL1Q96MI9 1066 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 UGT1A7Q9HAW7 530 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 UGT1A10Q9HAW8 530 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 UGT1A8Q9HAW9 530 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 THAP1Q9NVV9 213 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 TCEAL9Q9UHQ7 104 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 MAD1L1Q9Y6D9 718 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 H3BNX3 289 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 APOC4-APOC2K7ER74 178 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 NFIBO00712 420 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 MCF2LO15068 1137 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 PEX1O43933 1283 aa14.64□□□□□ -0.07
LDB3-209ENST00000623056 APOC2P02655 101 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms