RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 CCNT2O60583 730 aaKnown RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 FAM13AO94988 1023 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 INHBBP09529 407 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ALOX5P09917 674 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 TMEM253P0C7T8 217 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 THRAP10827 490 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 CETPP11597 493 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ITIH2P19823 946 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 TCEA1P23193 301 aaKnown RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 JAK1P23458 1154 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 MZF1P28698 734 aaPredicted RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 COILP38432 576 aaPredicted RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 STAT2P52630 851 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 SLC5A3P53794 718 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 KRT76Q01546 638 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 BTKQ06187 659 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 IKQ13123 557 aaPredicted RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 GRAMD1BQ3KR37 738 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 BTBD8Q5XKL5 378 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 SYDE1Q6ZW31 735 aaPredicted RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 FRA10AC1Q70Z53 315 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 TPH2Q8IWU9 490 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 CCDC105Q8IYK2 499 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ZDHHC14Q8IZN3 488 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 MYCT1Q8N699 235 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 RBM15BQ8NDT2 890 aaKnown RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 KRT35Q92764 455 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 OXNAD1Q96HP4 312 aaPredicted RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 FAM20AQ96MK3 541 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 HSD17B14Q9BPX1 270 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 TMEM120AQ9BXJ8 343 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 PAIP1Q9H074 479 aaKnown RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 TRABDQ9H4I3 376 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ARMC7Q9H6L4 198 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 RPAP3Q9H6T3 665 aaPredicted RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 DBNDD1Q9H9R9 158 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 AGPAT3Q9NRZ7 376 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 C6orf203Q9P0P8 240 aaPredicted RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ZMAT5Q9UDW3 170 aaKnown RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 TAGLN3Q9UI15 199 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ADAMTS6Q9UKP5 1117 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 GRID1Q9ULK0 1009 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ERGIC3Q9Y282 383 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ANKRD63C9JTQ0 380 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 SLITRK3O94933 977 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 STAMBPO95630 424 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 KRT6AP02538 564 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 KRT6BP04259 564 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ENO2P09104 434 aaPredicted RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 SRGAP2CP0DJJ0 459 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 SRGAP2BP0DMP2 458 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 PRKACBP22694 351 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 PSMC2P35998 433 aaKnown RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 THOP1P52888 689 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 MYL7Q01449 175 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ATP1A4Q13733 1029 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 HIC1Q14526 733 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ARHGAP44Q17R89 818 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 TWF2Q6IBS0 349 aaKnown RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 TTC27Q6P3X3 843 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 MYO1HQ8N1T3 1032 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 UBL4BQ8N7F7 174 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ACTRT2Q8TDY3 377 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 GIPC2Q8TF65 315 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 EGLN2Q96KS0 407 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 CEP295NLQ96MC4 621 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ZNF641Q96N77 438 aaPredicted RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 THTPAQ9BU02 230 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 ZC3H12CQ9C0D7 883 aaKnown RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 SEPT11Q9NVA2 429 aaKnown RBP7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 DMAC2Q9NW81 257 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 MKS1Q9NXB0 559 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 TBK1Q9UHD2 729 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 DCTN4Q9UJW0 460 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 AP4B1Q9Y6B7 739 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 SLX4Q8IY92 1834 aa7.78□□□□□ -1.16
TRIM49B-202ENST00000622138 A0A0G2JND7 137 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TESPA1A2RU30 521 aaPredicted RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 CAPN14A8MX76 684 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 SLC22A1O15245 554 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 EIF3DO15371 548 aaKnown RBP eCLIP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TYROBPO43914 113 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 SORBS3O60504 671 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 SF3B1O75533 1304 aaKnown RBP eCLIP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 PSMD10O75832 226 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 CRTAMO95727 393 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 C6orf222P0C671 652 aaPredicted RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 P4HA1P13674 534 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 CCDC130P13994 396 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 GAP43P17677 238 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 CA4P22748 312 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 MAN1A1P33908 653 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TUFMP49411 452 aaKnown RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 HADHBP55084 474 aaKnown RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 HSPA14Q0VDF9 509 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 MOGQ16653 247 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TMTC4Q5T4D3 741 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 EGFLAMQ63HQ2 1017 aa7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 ZNF746Q6NUN9 644 aaPredicted RBP7.77□□□□□ -1.17
TRIM49B-202ENST00000622138 TATDN1Q6P1N9 297 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms