RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PCDH18Q9HCL0 1135 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 CD248Q9HCU0 757 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 GGT7Q9UJ14 662 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 ZNF236Q9UL36 1845 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.83□□□□□ -0.84
PDPN-212ENST00000621990 TCRBV9S1A1TA0A576 114 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 UNC5CO95185 931 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 ELK3P41970 407 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 MSH2P43246 934 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 PTPN9P43378 593 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 NRLP54845 237 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 CDC42EP1Q00587 391 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 BBS9Q3SYG4 887 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 SLC27A1Q6PCB7 646 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 APBB1IPQ7Z5R6 666 aaPredicted RBP9.83□□□□□ -0.84
PDPN-212ENST00000621990 PCDH19Q8TAB3 1148 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 LRRC8CQ8TDW0 803 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 SLC44A1Q8WWI5 657 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 PAIP2Q9BPZ3 127 aaKnown RBP9.83□□□□□ -0.84
PDPN-212ENST00000621990 CXCL16Q9H2A7 254 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 CNTN3Q9P232 1028 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 USH1CQ9Y6N9 552 aa9.83□□□□□ -0.84
PDPN-212ENST00000621990 APOL1O14791 398 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 PAPSS1O43252 624 aaPredicted RBP9.82□□□□□ -0.84
PDPN-212ENST00000621990 GPR32O75388 356 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 TOMM70O94826 608 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 DHRS4L1P0CG22 281 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 SMPD1P17405 629 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 SDC4P31431 198 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 HDAC4P56524 1084 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 SNX16P57768 344 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 KCNJ2P63252 427 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 KRT81Q14533 505 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 LVRNQ6Q4G3 990 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 C4orf22Q6V702 233 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 FAM47EQ6ZV65 393 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 ZC3H18Q86VM9 953 aaKnown RBP9.82□□□□□ -0.84
PDPN-212ENST00000621990 ZNF398Q8TD17 642 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 FAM172AQ8WUF8 416 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 C10orf82Q8WW14 230 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 MS4A4AQ96JQ5 239 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 VPS11Q9H270 941 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 SLCO1B3Q9NPD5 702 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 PIK3R2O00459 728 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 PPEF2O14830 753 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 ECM2O94769 699 aaPredicted RBP9.82□□□□□ -0.84
PDPN-212ENST00000621990 NPTXRO95502 500 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 SLC8A1P32418 973 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 EPHX2P34913 555 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 MAGEA3P43357 314 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 RGS7P49802 495 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 GTF2A1P52655 376 aaPredicted RBP9.82□□□□□ -0.84
PDPN-212ENST00000621990 GRB14Q14449 540 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 DPYSL2Q16555 572 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 HHATQ5VTY9 493 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 DPH6Q7L8W6 267 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 LIMS2Q7Z4I7 341 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 TBC1D1Q86TI0 1168 aaPredicted RBP9.82□□□□□ -0.84
PDPN-212ENST00000621990 ACOT1Q86TX2 421 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 ZNF75CPQ92670 426 aaPredicted RBP9.82□□□□□ -0.84
PDPN-212ENST00000621990 SNRNP25Q9BV90 132 aaKnown RBP9.82□□□□□ -0.84
PDPN-212ENST00000621990 NOD2Q9HC29 1040 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 CHMP2BQ9UQN3 213 aa9.82□□□□□ -0.84
PDPN-212ENST00000621990 PCNTO95613 3336 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 RRN3P2A6NIE6 340 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 KBTBD13C9JR72 458 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 PDHXO00330 501 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 IGF2BP3O00425 579 aaKnown RBP eCLIP9.81□□□□□ -0.84
PDPN-212ENST00000621990 GRAP2O75791 330 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 ETV4P43268 484 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 GCLCP48506 637 aaPredicted RBP9.81□□□□□ -0.84
PDPN-212ENST00000621990 NEK3P51956 506 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 YWHAZP63104 245 aaKnown RBP9.81□□□□□ -0.84
PDPN-212ENST00000621990 ZNF200P98182 395 aaPredicted RBP9.81□□□□□ -0.84
PDPN-212ENST00000621990 ATP11AP98196 1134 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 SLC18A2Q05940 514 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 DGKDQ16760 1214 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 CDO1Q16878 200 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 SOWAHAQ2M3V2 549 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 PREPLQ4J6C6 727 aaPredicted RBP9.81□□□□□ -0.84
PDPN-212ENST00000621990 C1orf228Q6PIY5 440 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 SLC26A9Q7LBE3 791 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 OTOAQ7RTW8 1153 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 CHSY1Q86X52 802 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 MCUQ8NE86 351 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.81□□□□□ -0.84
PDPN-212ENST00000621990 TCP10LQ8TDR4 215 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 KLHL29Q96CT2 875 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 PLAC1Q9HBJ0 212 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 SNTG2Q9NY99 539 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 TUBGCP4Q9UGJ1 667 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 ZNF180Q9UJW8 692 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 CHKBQ9Y259 395 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 SNX9Q9Y5X1 595 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 SCN4AP35499 1836 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 IQANK1A0A1B0GTG1 560 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 MBLAC1A4D2B0 266 aaPredicted RBP9.81□□□□□ -0.84
PDPN-212ENST00000621990 H7C0C1 242 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 DCTN3O75935 186 aa9.81□□□□□ -0.84
PDPN-212ENST00000621990 ATP5HO75947 161 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms