RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 TMEM35BQ8NCS4 154 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 EXD1Q8NHP7 514 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 COPS5Q92905 334 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 TTC17Q96AE7 1141 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 FAM136AQ96C01 138 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 MYLK2Q9H1R3 596 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 EURLQ9NYK6 297 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 GRID1Q9ULK0 1009 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 SYNPO2Q9UMS6 1093 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 ZNF831Q5JPB2 1677 aa11.14□□□□□ -0.63
CDH1-214ENST00000621016 PDLIM1O00151 329 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 ASMTLO95671 621 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 GSTA2P09210 222 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 CXCL8P10145 99 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 MAN1A1P33908 653 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 ZBTB16Q05516 673 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 CD300CQ08708 224 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 RALGDSQ12967 914 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 MDH1BQ5I0G3 518 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 BSPRYQ5W0U4 402 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 RNF169Q8NCN4 708 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 NRG4Q8WWG1 115 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 CFAP36Q96G28 342 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 CATSPER2Q96P56 530 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 LRRC37BQ96QE4 947 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 TRIM56Q9BRZ2 755 aaKnown RBP11.13□□□□□ -0.63
CDH1-214ENST00000621016 TIPINQ9BVW5 301 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 MAK16Q9BXY0 300 aaKnown RBP11.13□□□□□ -0.63
CDH1-214ENST00000621016 NR2E3Q9Y5X4 410 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 C10orf71Q711Q0 1435 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 THSD7AQ9UPZ6 1657 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 BRCA2P51587 3418 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 MAPK13O15264 365 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 IL1R2P27930 398 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 RXRBP28702 533 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 PHEXP78562 749 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 STAT4Q14765 748 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 HSDL1Q3SXM5 330 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 ZNF568Q3ZCX4 644 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 FNBP1LQ5T0N5 605 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 CENPUQ71F23 418 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 PORCNQ9H237 461 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 AVENQ9NQS1 362 aaPredicted RBP11.13□□□□□ -0.63
CDH1-214ENST00000621016 HMGXB4Q9UGU5 601 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 FAF1Q9UNN5 650 aaPredicted RBP11.13□□□□□ -0.63
CDH1-214ENST00000621016 AFG3L2Q9Y4W6 797 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 TRIM17Q9Y577 477 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 GMEB1Q9Y692 573 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 IKBKGQ9Y6K9 419 aa11.13□□□□□ -0.63
CDH1-214ENST00000621016 GREB1LQ9C091 1923 aaPredicted RBP11.13□□□□□ -0.63
CDH1-214ENST00000621016 COL11A2P13942 1736 aaPredicted RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 LTBP1Q14766 1721 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 A0A0B4J269 797 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 TMEM191CA6NGB0 347 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 SRRM3A6NNA2 597 aaPredicted RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 PSTPIP1O43586 416 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 PDGFRBP09619 1106 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 KITP10721 976 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 UBA1P22314 1058 aaKnown RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 MMP8P22894 467 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 BNIP1Q12981 228 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 TFDP3Q5H9I0 405 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 PPP6R3Q5H9R7 873 aaPredicted RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 SPDYCQ5MJ68 293 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 PLEKHA7Q6IQ23 1121 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 UNC45BQ8IWX7 931 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 KATNAL2Q8IYT4 538 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 RCOR2Q8IZ40 523 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 FBXO36Q8NEA4 188 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 HEXIM2Q96MH2 286 aaKnown RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 ASCC2Q9H1I8 757 aaPredicted RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 PIM2Q9P1W9 311 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 MAGED2Q9UNF1 606 aaPredicted RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 NRXN2Q9P2S2 1712 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 ATP8B3O60423 1300 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 CCDC195A0A1B0GUA6 201 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 CFAP69A5D8W1 941 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 H7C0C1 242 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 TIMM44O43615 452 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 FOXD2O60548 495 aaPredicted RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 FAM155BO75949 473 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 ENDOUP21128 410 aaKnown RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 ATP5OP48047 213 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 SPARCL1Q14515 664 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 DUOXA2Q1HG44 320 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 TREML2Q5T2D2 321 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 EEF1DP3Q658K8 133 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 KLHL35Q6PF15 583 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 PPP1R21Q6ZMI0 780 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 NAT14Q8WUY8 206 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 CENPKQ9BS16 269 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 SLC13A1Q9BZW2 595 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 SLC17A7Q9P2U7 560 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 MARCOQ9UEW3 520 aaPredicted RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 COL4A5P29400 1685 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 E2F8A0AVK6 867 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 DNALI1O14645 258 aaPredicted RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 HSPA8P11142 646 aaKnown RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 KLRC2P26717 231 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 CPA2P48052 419 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms