RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 GCSHP23434 173 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 RAD52P43351 418 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 TDO2P48775 406 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 POLD2P49005 469 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 IRAK1P51617 712 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 LOXL3P58215 753 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 HSD11B2P80365 405 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 SF3A3Q12874 501 aaKnown RBP eCLIP4.3□□□□□ -1.72
LRRC39-204ENST00000620882 ZMYM1Q5SVZ6 1142 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 FAM102AQ5T9C2 384 aaPredicted RBP4.3□□□□□ -1.72
LRRC39-204ENST00000620882 ARHGAP40Q5TG30 622 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 C4orf50Q6ZRC1 276 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 Q8NA96 180 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 TP53I13Q8NBR0 393 aaPredicted RBP4.3□□□□□ -1.72
LRRC39-204ENST00000620882 ZFP28Q8NHY6 868 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 NUP133Q8WUM0 1156 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 HMGB4Q8WW32 186 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 KCNN1Q92952 543 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 LCORQ96JN0 433 aaPredicted RBP4.3□□□□□ -1.72
LRRC39-204ENST00000620882 LRRC37BQ96QE4 947 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 SMOQ99835 787 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 PLA2G12BQ9BX93 195 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 SIK2Q9H0K1 926 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 ANKEF1Q9NU02 776 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 ZSCAN32Q9NX65 697 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 CWC25Q9NXE8 425 aaPredicted RBP4.3□□□□□ -1.72
LRRC39-204ENST00000620882 SORCS3Q9UPU3 1222 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 SHOC2Q9UQ13 582 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 NAALADL1Q9UQQ1 740 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 RRP7AQ9Y3A4 280 aaKnown RBP4.3□□□□□ -1.72
LRRC39-204ENST00000620882 RAD54BQ9Y620 910 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 LMTK3Q96Q04 1460 aa4.3□□□□□ -1.72
LRRC39-204ENST00000620882 FER1L4A9Z1Z3 1794 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 A0A1W2PRQ8 180 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 PRR5-ARHGAP8B1AHC4 643 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 KLK10O43240 276 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 GJB3O75712 270 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 RECQL4O94761 1208 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 ELANEP08246 267 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 SPATA31D3P0C874 917 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 CD6P30203 668 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 RGS2P41220 211 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 CCR9P51686 369 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 PGDP52209 483 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 RAC3P60763 192 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 CD300EQ496F6 205 aaPredicted RBP4.29□□□□□ -1.72
LRRC39-204ENST00000620882 KIAA1324Q6UXG2 1013 aaKnown RBP4.29□□□□□ -1.72
LRRC39-204ENST00000620882 SPATA31D4Q6ZUB0 917 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 ENOSF1Q7L5Y1 443 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 R3HCC1LQ7Z5L2 792 aaKnown RBP4.29□□□□□ -1.72
LRRC39-204ENST00000620882 TSPYL6Q8N831 410 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 GNRHR2Q96P88 292 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 HAPLN3Q96S86 360 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 MRGBPQ9NV56 204 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 TMOD4Q9NZQ9 345 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 TBC1D29Q9UFV1 150 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 SERTAD3Q9UJW9 196 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 RIMKLBQ9ULI2 386 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 DERAQ9Y315 318 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 CCDC195A0A1B0GUA6 201 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 C9orf118A6NHY6 69 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 SLC38A8A6NNN8 435 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 H3BNC9 293 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 MTA2O94776 668 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 XRCC6P12956 609 aaKnown RBP eCLIP4.29□□□□□ -1.72
LRRC39-204ENST00000620882 CR2P20023 1033 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 GLDCP23378 1020 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 PBX1P40424 430 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 RBM5P52756 815 aaKnown RBP eCLIP4.29□□□□□ -1.72
LRRC39-204ENST00000620882 DRG2P55039 364 aaKnown RBP4.29□□□□□ -1.72
LRRC39-204ENST00000620882 POLE2P56282 527 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 VAMP2P63027 116 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 JAG1P78504 1218 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 OCA2Q04671 838 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 ELAVL1Q15717 326 aaKnown RBP4.29□□□□□ -1.72
LRRC39-204ENST00000620882 TMEM196Q5HYL7 178 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 TSHZ3Q63HK5 1081 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 CLEC9AQ6UXN8 241 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 B4GALNT4Q76KP1 1039 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 TTC30AQ86WT1 665 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 SUN3Q8TAQ9 357 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 SLC22A17Q8WUG5 538 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 RSC1A1Q92681 617 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 C7orf26Q96N11 449 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 SDF4Q9BRK5 362 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 UNKLQ9H9P5 680 aaKnown RBP4.29□□□□□ -1.72
LRRC39-204ENST00000620882 SLC27A6Q9Y2P4 619 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 CYP46A1Q9Y6A2 500 aa4.29□□□□□ -1.72
LRRC39-204ENST00000620882 BICDL2A1A5D9 508 aa4.28□□□□□ -1.72
LRRC39-204ENST00000620882 ANKRD18BA2A2Z9 1011 aa4.28□□□□□ -1.72
LRRC39-204ENST00000620882 BIN1O00499 593 aa4.28□□□□□ -1.72
LRRC39-204ENST00000620882 CCNT2O60583 730 aaKnown RBP4.28□□□□□ -1.72
LRRC39-204ENST00000620882 GNAT2P19087 354 aa4.28□□□□□ -1.72
LRRC39-204ENST00000620882 UQCRC1P31930 480 aa4.28□□□□□ -1.72
LRRC39-204ENST00000620882 CLK1P49759 484 aaKnown RBP4.28□□□□□ -1.72
LRRC39-204ENST00000620882 TBCCQ15814 346 aa4.28□□□□□ -1.72
LRRC39-204ENST00000620882 TBC1D10BQ4KMP7 808 aaPredicted RBP4.28□□□□□ -1.72
LRRC39-204ENST00000620882 CCDC92Q53HC0 331 aaPredicted RBP4.28□□□□□ -1.72
LRRC39-204ENST00000620882 RBM20Q5T481 1227 aaKnown RBP4.28□□□□□ -1.72
LRRC39-204ENST00000620882 UBAP2Q5T6F2 1119 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms