RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 DFFAO00273 331 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 FGFR2P21802 821 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 GTF2H3Q13889 308 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 KCNT1Q5JUK3 1230 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF57Q68EA5 555 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 PDPK2PQ6A1A2 396 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 MAML3Q96JK9 1138 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 BEX2Q9BXY8 128 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SUN2Q9UH99 717 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 COQ9O75208 318 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 TUBA1BP68363 451 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SLC1A5Q15758 541 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 TUBA1AQ71U36 451 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 STK32CQ86UX6 486 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 HEPHQ9BQS7 1158 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 PAGR1Q9BTK6 254 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 PLCL2Q9UPR0 1127 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SESN1Q9Y6P5 492 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 WDR27A2RRH5 827 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 AVILO75366 819 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 UFL1O94874 794 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 KLHL18O94889 574 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 RARGP13631 454 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ACSBG2Q5FVE4 666 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ARMCX4Q5H9R4 360 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 UBE2UQ5VVX9 321 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 DSTYKQ6XUX3 929 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 RTKN2Q8IZC4 609 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 PROM2Q8N271 834 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 Q8N9G6 341 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 FAM156AQ8NDB6 213 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 RNF145Q96MT1 663 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 AFF4Q9UHB7 1163 aaKnown RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 USP17L10C9JJH3 530 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 LAD1O00515 517 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 TRIM24O15164 1050 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 WFS1O76024 890 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 TRAF3Q13114 568 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF804AQ7Z570 1209 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 IQCKQ8N0W5 287 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 NMUR2Q9GZQ4 415 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 BRD7Q9NPI1 651 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 STARD13Q9Y3M8 1113 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 AP4B1Q9Y6B7 739 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 A0A087WXM4 84 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 NCF1BA6NI72 391 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 NCF1CA8MVU1 366 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 FAM25AB3EWG3 89 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 FAM25CB3EWG5 89 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 FAM25GB3EWG6 89 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 NCF1P14598 390 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SLC9A3P48764 834 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 RIPK1Q13546 671 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 PFKFB3Q16875 520 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 DNAJB7Q7Z6W7 309 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 NPAS2Q99743 824 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 CENPXA8MT69 81 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 GGPS1O95749 300 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 VAMP7P51809 220 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 USP10Q14694 798 aaKnown RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SYDE2Q5VT97 1194 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ARHGEF19Q8IW93 802 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 NSMCE3Q96MG7 304 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 TTYH2Q9BSA4 534 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 MRPL47Q9HD33 250 aaKnown RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SLC35C2Q9NQQ7 365 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SALL4Q9UJQ4 1053 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 FBP2O00757 339 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SCAMP1O15126 338 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 TEX28O15482 410 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 CPNE3O75131 537 aaKnown RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 KDM4BO94953 1096 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 GARTP22102 1010 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 PTENP60484 403 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ARF5P84085 180 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 CHRNDQ07001 517 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 TRIQKQ629K1 86 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 EXOC3L1Q86VI1 746 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 POLG2Q9UHN1 485 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF221Q9UK13 617 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 PCDH11XQ9BZA7 1347 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SMIM31A0A1B0GVY4 71 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 AURKAO14965 403 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 FCHO2Q0JRZ9 810 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 DLG1Q12959 904 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 FNBP1LQ5T0N5 605 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 GADL1Q6ZQY3 521 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 DCLK3Q9C098 648 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SLC52A2Q9HAB3 445 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 KPNA7A9QM74 516 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 PLOD3O60568 738 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 LIFRP42702 1097 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF280DQ6N043 979 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 SNX29P2Q8IUI4 249 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 RHOT1Q8IXI2 618 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 ENKURQ8TC29 256 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 RGS17Q9UGC6 210 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-214ENST00000620676 GMEB1Q9Y692 573 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 BIVM-ERCC5R4GMW8 1640 aa5.2□□□□□ -1.58
VPS13D-214ENST00000620676 YEATS2Q9ULM3 1422 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms