RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 ZC3H18Q86VM9 953 aaKnown RBP20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 RASAL3Q86YV0 1011 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 ARRDC4Q8NCT1 418 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 MLXIPLQ9NP71 852 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 CTSHP09668 335 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 TUBP50607 506 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 CDH6P55285 790 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 C6orf118Q5T5N4 469 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 TWF2Q6IBS0 349 aaKnown RBP20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 TRMT10CQ7L0Y3 403 aaKnown RBP20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 GALNT15Q8N3T1 639 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 ALLCQ8N6M5 410 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 FAM81AQ8TBF8 368 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 TEKT4Q8WW24 435 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 SAYSD1Q9NPB0 183 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 PGK1P00558 417 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 CHN1P15882 459 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 TFE3P19532 575 aaPredicted RBP20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 DRD4P21917 467 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 MXRA7P84157 204 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 OASLQ15646 514 aaKnown RBP20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 ZBTB6Q15916 424 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 FSCN1Q16658 493 aaKnown RBP20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 MGARPQ8TDB4 240 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 ZIC5Q96T25 663 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 MAGEB5Q9BZ81 275 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 GABBR2O75899 941 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 FGFR1P11362 822 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 GPD1P21695 349 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 CTGFP29279 349 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 IFNAR2P48551 515 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 CCDC33Q8N5R6 958 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 GORASP1Q9BQQ3 440 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 SLC12A4Q9UP95 1085 aa20.21■□□□□ 0.83
LAPTM4B-204ENST00000619747 TRUB2O95900 331 aaKnown RBP20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 GABRB2P47870 512 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 CPT1AP50416 773 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 ATXN1P54253 815 aaKnown RBP20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 COPS2P61201 443 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 TAF11Q15544 211 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 GNASQ5JWF2 1037 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 FBXO47Q5MNV8 452 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 CXCL17Q6UXB2 119 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 POLNQ7Z5Q5 900 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 FNIP1Q8TF40 1166 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 NDRG1Q92597 394 aaKnown RBP20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 PGM2Q96G03 612 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 PLEKHA5Q9HAU0 1116 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 ASNSD1Q9NWL6 643 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 HESX1Q9UBX0 185 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 C2CD4BA6NLJ0 364 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 LCP1P13796 627 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 AFF1P51825 1210 aaKnown RBP20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 ZNF143P52747 638 aaPredicted RBP20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 ADAM17P78536 824 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 LRRC14Q15048 493 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 FAM47CQ5HY64 1035 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 FAM71DQ8N9W8 422 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 CCDC197Q8NCU1 140 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 ARHGAP39Q9C0H5 1083 aa20.2■□□□□ 0.82
LAPTM4B-204ENST00000619747 C17orf102A2RUQ5 167 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 LMNB2Q03252 620 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 NT5DC4Q86YG4 428 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 UNC45BQ8IWX7 931 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 KPNA7A9QM74 516 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 PAPSS1O43252 624 aaPredicted RBP20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 LUC7L3O95232 432 aaKnown RBP20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 ACAT1P24752 427 aaKnown RBP20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 MAGEA4P43358 317 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 PPP6R3Q5H9R7 873 aaPredicted RBP20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 NUGGCQ68CJ6 796 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 C1orf228Q6PIY5 440 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 C17orf99Q6UX52 265 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 ALKAL1Q6UXT8 129 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 ANKMY2Q8IV38 441 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 CYP4X1Q8N118 509 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 IPPQ9Y573 584 aa20.19■□□□□ 0.82
LAPTM4B-204ENST00000619747 DNALI1O14645 258 aaPredicted RBP20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 PRPSAP2O60256 369 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 GNL1P36915 607 aaPredicted RBP20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 SCNN1BP51168 640 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 RABGGTBP53611 331 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 CRHR2Q13324 411 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 CCDC14Q49A88 953 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 EXOC3L1Q86VI1 746 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 SLC35B2Q8TB61 432 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 SPATA18Q8TC71 538 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 RSAD2Q8WXG1 361 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 NAF1Q96HR8 494 aaKnown RBP20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 CNPY3Q9BT09 278 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 GGT7Q9UJ14 662 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 UBQLN1Q9UMX0 589 aaKnown RBP20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 ZSWIM8A7E2V4 1837 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 RARBP10826 455 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 CCND1P24385 295 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 UBXN11Q5T124 520 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 IFNL1Q8IU54 200 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 FAM172AQ8WUF8 416 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 ARHGEF2Q92974 986 aaKnown RBP20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 MAK16Q9BXY0 300 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms