RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 SCUBE3Q8IX30 993 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 ZSWIM2Q8NEG5 633 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 SRPK1Q96SB4 655 aaKnown RBP14.39□□□□□ -0.11
CNOT3-210ENST00000618939 ADARB2Q9NS39 739 aaKnown RBP14.39□□□□□ -0.11
CNOT3-210ENST00000618939 ARHGAP28Q9P2N2 729 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 DCDC2Q9UHG0 476 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 BAG5Q9UL15 447 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 CBX6O95503 412 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 ITGAVP06756 1048 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 CHRNB2P17787 502 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 ACO1P21399 889 aaKnown RBP14.38□□□□□ -0.11
CNOT3-210ENST00000618939 MMP8P22894 467 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 CNTFP26441 200 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 TMEM154Q6P9G4 183 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 RIOX2Q8IUF8 465 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 ACO2Q99798 780 aaKnown RBP14.38□□□□□ -0.11
CNOT3-210ENST00000618939 TRIM15Q9C019 465 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 SNTG2Q9NY99 539 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 KCNA3P22001 575 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 TRIP10Q15642 601 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 MFSD5Q6N075 450 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 ARHGEF38Q9NXL2 777 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 PKD1L3Q7Z443 1732 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.38□□□□□ -0.11
CNOT3-210ENST00000618939 TMEM191CA6NGB0 347 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 TNPO2O14787 897 aaKnown RBP14.38□□□□□ -0.11
CNOT3-210ENST00000618939 AP1G2O75843 785 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 RBL1P28749 1068 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 MED21Q13503 144 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 KBTBD12Q3ZCT8 623 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 POLNQ7Z5Q5 900 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 ADGRF2Q8IZF7 708 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 APBB2Q92870 758 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 OSMRQ99650 979 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 SPON2Q9BUD6 331 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 LRRC40Q9H9A6 602 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 DNAJC16Q9Y2G8 782 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 CXCL11O14625 94 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 ZNF862O60290 1169 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 MTA2O94776 668 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 NFICP08651 508 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 HOXD13P35453 343 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 PTGIRP43119 386 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 PLEKHA7Q6IQ23 1121 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 COLGALT1Q8NBJ5 622 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 PDCD6IPQ8WUM4 868 aaKnown RBP14.38□□□□□ -0.11
CNOT3-210ENST00000618939 ELMO2Q96JJ3 720 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 DRC3Q9H069 523 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 CDT1Q9H211 546 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 STARD13Q9Y3M8 1113 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 ATXN2Q99700 1313 aaKnown RBP14.38□□□□□ -0.11
CNOT3-210ENST00000618939 ATRNL1Q5VV63 1379 aa14.38□□□□□ -0.11
CNOT3-210ENST00000618939 CYP2B6P20813 491 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 ZNF235Q14590 738 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 C15orf59Q2T9L4 293 aaPredicted RBP14.37□□□□□ -0.11
CNOT3-210ENST00000618939 UBA6A0AVT1 1052 aaPredicted RBP14.37□□□□□ -0.11
CNOT3-210ENST00000618939 ALADP13716 330 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 RPL10AP62906 217 aaKnown RBP14.37□□□□□ -0.11
CNOT3-210ENST00000618939 NSUN2Q08J23 767 aaKnown RBP eCLIP14.37□□□□□ -0.11
CNOT3-210ENST00000618939 ANO4Q32M45 955 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 POTEAQ6S8J7 498 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 PABPC5Q96DU9 382 aaKnown RBP14.37□□□□□ -0.11
CNOT3-210ENST00000618939 MTFR1LQ9H019 292 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 TNFSF13BQ9Y275 285 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 FCHO1O14526 889 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 KCNA2P16389 499 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 SLC6A3Q01959 620 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 SIAH1Q8IUQ4 282 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 TLCD1Q96CP7 247 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 WDCPQ9H6R7 721 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 EML4Q9HC35 981 aaKnown RBP14.37□□□□□ -0.11
CNOT3-210ENST00000618939 TMEM59LQ9UK28 342 aa14.37□□□□□ -0.11
CNOT3-210ENST00000618939 MYH8P13535 1937 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 GNGT2O14610 69 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 SNX2O60749 519 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 C4BPAP04003 597 aaKnown RBP14.36□□□□□ -0.11
CNOT3-210ENST00000618939 SERPINB3P29508 390 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 VGLL4Q14135 290 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 TEDDM1Q5T9Z0 273 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 URGCPQ8TCY9 931 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 TMA16Q96EY4 203 aaKnown RBP14.36□□□□□ -0.11
CNOT3-210ENST00000618939 OLFM3Q96PB7 478 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 SETD4Q9NVD3 440 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 GRHL1Q9NZI5 618 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 CYB561D2O14569 222 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 KCNJ2P63252 427 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 TAF1CQ15572 869 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-210ENST00000618939 GRIK4Q16099 956 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 PCSK7Q16549 785 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 PDK4Q16654 411 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 TRABD2AQ86V40 505 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 NT5DC4Q86YG4 428 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 ZDHHC17Q8IUH5 632 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 FGD4Q96M96 766 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 TMEM109Q9BVC6 243 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 DLGAP2Q9P1A6 1054 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 COQ4Q9Y3A0 265 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 BANF1O75531 89 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 ADSSP30520 456 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 ZNF143P52747 638 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms