RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 TMEM60Q9H2L4 133 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 SPHK2Q9NRA0 654 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 THAP10Q9P2Z0 257 aaPredicted RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 DNM3Q9UQ16 869 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 CYP46A1Q9Y6A2 500 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 PPEF2O14830 753 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 GREM1O60565 184 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 TSPAN3O60637 253 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 TACC1O75410 805 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 REC8O95072 547 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 CTDNEP1O95476 244 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 GP1BBP13224 206 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 HDCP19113 662 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 U2AF2P26368 475 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNCA-213ENST00000618500 SLC6A11P48066 632 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 SLC12A3P55017 1021 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 ZXDBP98169 803 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 ARID5BQ14865 1188 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 DCAF12L1Q5VU92 463 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 BTBD8Q5XKL5 378 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 ARMCX6Q7L4S7 300 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 FAM217AQ8IXS0 508 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 ARL14EPQ8N8R7 260 aaPredicted RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 RNF166Q96A37 237 aaPredicted RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 FAM131CQ96AQ9 280 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 CCDC97Q96F63 343 aaPredicted RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 XPO6Q96QU8 1125 aaKnown RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 SLC22A12Q96S37 553 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 STRA6Q9BX79 667 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 BHMT2Q9H2M3 363 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 LINC00597Q9H2U6 94 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 SGK2Q9HBY8 427 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 DPP3Q9NY33 737 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 ABI2Q9NYB9 513 aaPredicted RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 DEC1Q9P2X7 70 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 ACSL6Q9UKU0 697 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 ASCC3Q8N3C0 2202 aaKnown RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 TENM4Q6N022 2769 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 ATP8B3O60423 1300 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 C2orf78A6NCI8 922 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 CCDC169A6NNP5 214 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 TIMM44O43615 452 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 TULP3O75386 442 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 PENKP01210 267 aaPredicted RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 ITGB2P05107 769 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 CD27P26842 260 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 CCT6AP40227 531 aaKnown RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 CCT2P78371 535 aaKnown RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 ATP2C1P98194 919 aaPredicted RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 WSCD1Q658N2 575 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 Q6ZNB5 142 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 IQCHQ86VS3 1027 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 SPATA2LQ8IUW3 424 aaPredicted RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNCA-213ENST00000618500 STKLD1Q8NE28 680 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 RLN3Q8WXF3 142 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 AIFM3Q96NN9 605 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 ORAI3Q9BRQ5 295 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 TCHPQ9BT92 498 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 RUSC1Q9BVN2 902 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 FSCN3Q9NQT6 498 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 MAGEC2Q9UBF1 373 aaPredicted RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 PCDHB6Q9Y5E3 794 aa4.89□□□□□ -1.63
SNCA-213ENST00000618500 TIMM13Q9Y5L4 95 aaPredicted RBP4.89□□□□□ -1.63
SNCA-213ENST00000618500 GP1BAP07359 652 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 FDPSP14324 419 aaKnown RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 HARS2P49590 506 aaKnown RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 CCR5P51681 352 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 COPAP53621 1224 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 VAC14Q08AM6 782 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 SFSWAPQ12872 951 aaKnown RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 CAMK2GQ13555 558 aaPredicted RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 C10orf76Q5T2E6 689 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 SLC39A4Q6P5W5 647 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 USP30Q70CQ3 517 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 KIAA0907Q7Z7F0 614 aaPredicted RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 BRSK2Q8IWQ3 736 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 FRMD1Q8N878 549 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 FAM181AQ8N9Y4 354 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 RHBDD1Q8TEB9 315 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 LRRC15Q8TF66 581 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 CACTINQ8WUQ7 758 aaKnown RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 GOLGA1Q92805 767 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 CRELD1Q96HD1 420 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 ZBTB45Q96K62 511 aaPredicted RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 PYM1Q9BRP8 204 aaKnown RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 B3GNT4Q9C0J1 378 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 ELOVL4Q9GZR5 314 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 PRDM16Q9HAZ2 1276 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 STARD5Q9NSY2 213 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 LARSQ9P2J5 1176 aaKnown RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 IL17BQ9UHF5 180 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 ADAMTS1Q9UHI8 967 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 CYP8B1Q9UNU6 501 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 CPQQ9Y646 472 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 K7ENP7 123 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 WNT7AO00755 349 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 SLC16A4O15374 487 aa4.88□□□□□ -1.63
SNCA-213ENST00000618500 LDOC1O95751 146 aaPredicted RBP4.88□□□□□ -1.63
SNCA-213ENST00000618500 AFPP02771 609 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms