RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 ARID3AQ99856 593 aa26.6■■□□□ 1.85
VEGFA-228ENST00000617771 FAM186AA6NE01 2351 aa26.6■■□□□ 1.85
VEGFA-228ENST00000617771 CYP26A1O43174 497 aa26.59■■□□□ 1.85
VEGFA-228ENST00000617771 OPRD1P41143 372 aa26.59■■□□□ 1.85
VEGFA-228ENST00000617771 RAD23BP54727 409 aa26.59■■□□□ 1.85
VEGFA-228ENST00000617771 CUL2Q13617 745 aa26.59■■□□□ 1.85
VEGFA-228ENST00000617771 MORC3Q14149 939 aa26.59■■□□□ 1.85
VEGFA-228ENST00000617771 SIM2Q14190 667 aaPredicted RBP26.59■■□□□ 1.85
VEGFA-228ENST00000617771 GPR161Q8N6U8 529 aaKnown RBP26.59■■□□□ 1.85
VEGFA-228ENST00000617771 RPLP0P6Q8NHW5 317 aa26.59■■□□□ 1.85
VEGFA-228ENST00000617771 NELFBQ8WX92 580 aa26.59■■□□□ 1.85
VEGFA-228ENST00000617771 ACDQ96AP0 544 aa26.59■■□□□ 1.85
VEGFA-228ENST00000617771 DUSP9Q99956 384 aaKnown RBP26.59■■□□□ 1.85
VEGFA-228ENST00000617771 CYLDQ9NQC7 956 aa26.59■■□□□ 1.85
VEGFA-228ENST00000617771 PTPRZ1P23471 2315 aaPredicted RBP26.59■■□□□ 1.85
VEGFA-228ENST00000617771 RIF1Q5UIP0 2472 aaKnown RBP26.58■■□□□ 1.85
VEGFA-228ENST00000617771 ATP5C1P36542 298 aaKnown RBP26.58■■□□□ 1.85
VEGFA-228ENST00000617771 PGFP49763 221 aa26.58■■□□□ 1.85
VEGFA-228ENST00000617771 KIF11P52732 1056 aa26.58■■□□□ 1.85
VEGFA-228ENST00000617771 SLC8A3P57103 927 aa26.58■■□□□ 1.85
VEGFA-228ENST00000617771 GOLGA8FQ08AF8 430 aa26.58■■□□□ 1.85
VEGFA-228ENST00000617771 GOLGA8DPQ0D2H9 430 aa26.58■■□□□ 1.85
VEGFA-228ENST00000617771 GAB4Q2WGN9 574 aa26.58■■□□□ 1.85
VEGFA-228ENST00000617771 ARHGAP17Q68EM7 881 aa26.58■■□□□ 1.85
VEGFA-228ENST00000617771 TTI2Q6NXR4 508 aa26.58■■□□□ 1.85
VEGFA-228ENST00000617771 RHBDF2Q6PJF5 856 aa26.58■■□□□ 1.85
VEGFA-228ENST00000617771 EZH1Q92800 747 aaPredicted RBP26.58■■□□□ 1.85
VEGFA-228ENST00000617771 MYH10P35580 1976 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 CCDC163A0A0D9SF12 145 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 PPP1R3GB7ZBB8 358 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 BIN1O00499 593 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 HRO43593 1189 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 IRF1P10914 325 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 ADH5P11766 374 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 BMP6P22004 513 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 TBXAS1P24557 533 aaPredicted RBP26.57■■□□□ 1.84
VEGFA-228ENST00000617771 EIF2DP41214 584 aaKnown RBP26.57■■□□□ 1.84
VEGFA-228ENST00000617771 FMO5P49326 533 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 PSEN1P49768 467 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 LAIR1Q6GTX8 287 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 CCDC186Q7Z3E2 898 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 CAMKK1Q8N5S9 505 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 CTNND2Q9UQB3 1225 aa26.57■■□□□ 1.84
VEGFA-228ENST00000617771 A0A1W2PQH9 124 aa26.56■■□□□ 1.84
VEGFA-228ENST00000617771 PMM2O15305 246 aa26.56■■□□□ 1.84
VEGFA-228ENST00000617771 UBE2HP62256 183 aa26.56■■□□□ 1.84
VEGFA-228ENST00000617771 CETN1Q12798 172 aa26.56■■□□□ 1.84
VEGFA-228ENST00000617771 SYT13Q7L8C5 426 aa26.56■■□□□ 1.84
VEGFA-228ENST00000617771 TADA2BQ86TJ2 420 aa26.56■■□□□ 1.84
VEGFA-228ENST00000617771 PNKPQ96T60 521 aa26.56■■□□□ 1.84
VEGFA-228ENST00000617771 UBXN6Q9BZV1 441 aa26.56■■□□□ 1.84
VEGFA-228ENST00000617771 OSER1Q9NX31 292 aa26.56■■□□□ 1.84
VEGFA-228ENST00000617771 USP3Q9Y6I4 520 aa26.56■■□□□ 1.84
VEGFA-228ENST00000617771 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.55■■□□□ 1.84
VEGFA-228ENST00000617771 TBX18O95935 607 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 RARGP13631 454 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 ID4P47928 161 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 GAD2Q05329 585 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 PAK1Q13153 545 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 LPAL2Q16609 132 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 LY6G5CQ5SRR4 150 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 KLHDC10Q6PID8 442 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 CEP68Q76N32 757 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 BBS7Q8IWZ6 715 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 ANKRD52Q8NB46 1076 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 KLF16Q9BXK1 252 aaPredicted RBP26.55■■□□□ 1.84
VEGFA-228ENST00000617771 NMUR1Q9HB89 426 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.55■■□□□ 1.84
VEGFA-228ENST00000617771 CHMP5Q9NZZ3 219 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 NAGPAQ9UK23 515 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 LSM7Q9UK45 103 aaKnown RBP26.55■■□□□ 1.84
VEGFA-228ENST00000617771 MYO16Q9Y6X6 1858 aa26.55■■□□□ 1.84
VEGFA-228ENST00000617771 K7EQS6 105 aa26.54■■□□□ 1.84
VEGFA-228ENST00000617771 GNA14O95837 355 aa26.54■■□□□ 1.84
VEGFA-228ENST00000617771 RALAP11233 206 aa26.54■■□□□ 1.84
VEGFA-228ENST00000617771 PXNP49023 591 aaPredicted RBP26.54■■□□□ 1.84
VEGFA-228ENST00000617771 LRMPQ12912 555 aa26.54■■□□□ 1.84
VEGFA-228ENST00000617771 SRSF5Q13243 272 aaKnown RBP26.54■■□□□ 1.84
VEGFA-228ENST00000617771 DMC1Q14565 340 aa26.54■■□□□ 1.84
VEGFA-228ENST00000617771 BTBD8Q5XKL5 378 aa26.54■■□□□ 1.84
VEGFA-228ENST00000617771 TRIML1Q8N9V2 468 aa26.54■■□□□ 1.84
VEGFA-228ENST00000617771 CDK5RAP1Q96SZ6 601 aaKnown RBP26.54■■□□□ 1.84
VEGFA-228ENST00000617771 DNMT3LQ9UJW3 386 aa26.54■■□□□ 1.84
VEGFA-228ENST00000617771 P4HA2O15460 535 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 APODP05090 189 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 HOXC13P31276 330 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 SLC6A11P48066 632 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 SEC13P55735 322 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 PREPLQ4J6C6 727 aaPredicted RBP26.53■■□□□ 1.84
VEGFA-228ENST00000617771 SGO2Q562F6 1265 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 C10orf120Q5SQS8 335 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 HTR3DQ70Z44 454 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.53■■□□□ 1.84
VEGFA-228ENST00000617771 ZNF276Q8N554 614 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 USP33Q8TEY7 942 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 NT5C1BQ96P26 610 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 HHIPQ96QV1 700 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 SPHK2Q9NRA0 654 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 CLIC5Q9NZA1 410 aa26.53■■□□□ 1.84
VEGFA-228ENST00000617771 HESX1Q9UBX0 185 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms