RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 FYNP06241 537 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 KRT7P08729 469 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 POU2F2P09086 479 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 ZDHHC11BP0C7U3 371 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 GTF2F1P35269 517 aaKnown RBP eCLIP12.29□□□□□ -0.44
PDPN-211ENST00000617617 FLT3P36888 993 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 SLC5A3P53794 718 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 RWDD2BP57060 319 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 C9orf50Q5SZB4 431 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 CC2D1AQ6P1N0 951 aaPredicted RBP12.29□□□□□ -0.44
PDPN-211ENST00000617617 SPPL3Q8TCT6 385 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 CLEC4CQ8WTT0 213 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 HDAC7Q8WUI4 952 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 MYRFLQ96LU7 910 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 ADAM12O43184 909 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 GJB6O95452 261 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 LTFP02788 710 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 PDGFRAP16234 1089 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 SDC4P31431 198 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 PLD1Q13393 1074 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 SHHQ15465 462 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 MSANTD2Q6P1R3 559 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 LILRA6Q6PI73 481 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 ALG3Q92685 438 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 LMAN2LQ9H0V9 348 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 GOLPH3Q9H4A6 298 aa12.29□□□□□ -0.44
PDPN-211ENST00000617617 NGRNQ9NPE2 291 aaKnown RBP12.29□□□□□ -0.44
PDPN-211ENST00000617617 OR1D2P34982 312 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 RGS19P49795 217 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 SMC1AQ14683 1233 aaKnown RBP12.28□□□□□ -0.44
PDPN-211ENST00000617617 HADHQ16836 314 aaKnown RBP12.28□□□□□ -0.44
PDPN-211ENST00000617617 OTUD1Q5VV17 481 aaPredicted RBP12.28□□□□□ -0.44
PDPN-211ENST00000617617 CYP4V2Q6ZWL3 525 aaPredicted RBP12.28□□□□□ -0.44
PDPN-211ENST00000617617 MON1AQ86VX9 555 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 MNS1Q8NEH6 495 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 CMASQ8NFW8 434 aaPredicted RBP12.28□□□□□ -0.44
PDPN-211ENST00000617617 COG1Q8WTW3 980 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 NAP1L3Q99457 506 aaPredicted RBP12.28□□□□□ -0.44
PDPN-211ENST00000617617 CRISPLD1Q9H336 500 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 PRDM16Q9HAZ2 1276 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 CLIC5Q9NZA1 410 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 STAP1Q9ULZ2 295 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 MDM4O15151 490 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 RNF8O76064 485 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 TRUB2O95900 331 aaKnown RBP12.28□□□□□ -0.44
PDPN-211ENST00000617617 PPP3CCP48454 512 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 ARSEP51690 589 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 TAS2R40P59535 323 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 NNTQ13423 1086 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 PPP2R5EQ16537 467 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 PHLDB2Q86SQ0 1253 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 RCOR2Q8IZ40 523 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 KRT35Q92764 455 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 TGS1Q96RS0 853 aaKnown RBP12.28□□□□□ -0.44
PDPN-211ENST00000617617 ABCC13Q9NSE7 274 aa12.28□□□□□ -0.44
PDPN-211ENST00000617617 SLU7O95391 586 aaKnown RBP12.27□□□□□ -0.44
PDPN-211ENST00000617617 CTNNB1P35222 781 aa12.27□□□□□ -0.44
PDPN-211ENST00000617617 TAF5Q15542 800 aa12.27□□□□□ -0.44
PDPN-211ENST00000617617 RAB30Q15771 203 aa12.27□□□□□ -0.44
PDPN-211ENST00000617617 EMC1Q8N766 993 aa12.27□□□□□ -0.44
PDPN-211ENST00000617617 ATAD1Q8NBU5 361 aa12.27□□□□□ -0.44
PDPN-211ENST00000617617 RBM41Q96IZ5 413 aaKnown RBP12.27□□□□□ -0.44
PDPN-211ENST00000617617 EMILIN2Q9BXX0 1053 aa12.27□□□□□ -0.44
PDPN-211ENST00000617617 PACSIN2Q9UNF0 486 aaPredicted RBP12.27□□□□□ -0.44
PDPN-211ENST00000617617 ASB3Q9Y575 518 aa12.27□□□□□ -0.44
PDPN-211ENST00000617617 YJEFN3A6XGL0 299 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 TMEM110-MUSTN1A8MSY1 372 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 E7ENQ6 273 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 KCNK3O14649 394 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
PDPN-211ENST00000617617 F9P00740 461 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 USP17L7P0C7H9 530 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 ATF6P18850 670 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 HDAC4P56524 1084 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 SCAPQ12770 1279 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 BOLA3Q53S33 107 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 DENND5BQ6ZUT9 1274 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 DEFB106AQ8N104 65 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 MRPL43Q8N983 215 aaKnown RBP12.27□□□□□ -0.45
PDPN-211ENST00000617617 PDZD8Q8NEN9 1154 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 MYRIPQ8NFW9 859 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 GOLGA1Q92805 767 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 NTAN1Q96AB6 310 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 KLHL5Q96PQ7 755 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 TLR9Q9NR96 1032 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 FBXW11Q9UKB1 542 aa12.27□□□□□ -0.45
PDPN-211ENST00000617617 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.26□□□□□ -0.45
PDPN-211ENST00000617617 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.26□□□□□ -0.45
PDPN-211ENST00000617617 C2orf71A6NGG8 1288 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 C3orf70A6NLC5 250 aaPredicted RBP12.26□□□□□ -0.45
PDPN-211ENST00000617617 SLC38A8A6NNN8 435 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 H3BNC9 293 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 PGRMC1O00264 195 aaKnown RBP12.26□□□□□ -0.45
PDPN-211ENST00000617617 TEX28O15482 410 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 CTIFO43310 598 aaKnown RBP12.26□□□□□ -0.45
PDPN-211ENST00000617617 SEC24AO95486 1093 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 ADH1AP07327 375 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 TUBP50607 506 aa12.26□□□□□ -0.45
PDPN-211ENST00000617617 ZNF135P52742 658 aaPredicted RBP12.26□□□□□ -0.45
PDPN-211ENST00000617617 YWHAGP61981 247 aaKnown RBP eCLIP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms