RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 BST1Q10588 318 aa5.85□□□□□ -1.47
SYNCRIP-204ENST00000616122 TAF1BQ53T94 588 aaPredicted RBP5.85□□□□□ -1.47
SYNCRIP-204ENST00000616122 CELF3Q5SZQ8 465 aaKnown RBP5.85□□□□□ -1.47
SYNCRIP-204ENST00000616122 CD101Q93033 1021 aa5.85□□□□□ -1.47
SYNCRIP-204ENST00000616122 LRRC39Q96DD0 335 aa5.85□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZMAT2Q96NC0 199 aaKnown RBP5.85□□□□□ -1.47
SYNCRIP-204ENST00000616122 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.85□□□□□ -1.471e-7■■■■□ 22.2
SYNCRIP-204ENST00000616122 FNDC3AQ9Y2H6 1198 aaKnown RBP5.85□□□□□ -1.47
SYNCRIP-204ENST00000616122 C2CD2Q9Y426 696 aa5.85□□□□□ -1.47
SYNCRIP-204ENST00000616122 ALS2Q96Q42 1657 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 C3orf70A6NLC5 250 aaPredicted RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 FCHO1O14526 889 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 USP12O75317 370 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 RECQL4O94761 1208 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 VNN1O95497 513 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 GSTA2P09210 222 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 TCF4P15884 667 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 ACAT1P24752 427 aaKnown RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 ACADSBP45954 432 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 SLC27A1Q6PCB7 646 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 DRICH1Q6PGQ1 229 aaPredicted RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 DEFB106AQ8N104 65 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 THTPAQ9BU02 230 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 SNRNP25Q9BV90 132 aaKnown RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 CEP41Q9BYV8 373 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 FAM96AQ9H5X1 160 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 MINDY3Q9H8M7 445 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 STYXL1Q9Y6J8 313 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 CACNA1HO95180 2353 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 SDR42E2A6NKP2 422 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 TTLL13PA6NNM8 815 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 ITGAVP06756 1048 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 MYL2P10916 166 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 PYGBP11216 843 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 GNAT1P11488 350 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 ATP4AP20648 1035 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 AMPD1P23109 780 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 GPD2P43304 727 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 TPI1P60174 286 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 SLC10A6Q3KNW5 377 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 PAN2Q504Q3 1202 aaKnown RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 RNASEH2BQ5TBB1 312 aaKnown RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 ITPRIPL1Q6GPH6 555 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 C6orf89Q6UWU4 347 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 HSFY1Q96LI6 401 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 TBC1D10AQ9BXI6 508 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 B3GNT5Q9BYG0 378 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 GPR88Q9GZN0 384 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 DCLRE1BQ9H816 532 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 BATF3Q9NR55 127 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 TELO2Q9Y4R8 837 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 MYO18AQ92614 2054 aaKnown RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZNF541Q9H0D2 1346 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 BANF1O75531 89 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 POLBP06746 335 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 ELF3P78545 371 aaPredicted RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 SLC1A5Q15758 541 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 DGKDQ16760 1214 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 ECHDC2Q86YB7 292 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 CCNJLQ8IV13 435 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 CMASQ8NFW8 434 aaPredicted RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 AAASQ9NRG9 546 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 ASXL3Q9C0F0 2248 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 KPNA7A9QM74 516 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 F9P00740 461 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 PDHA1P08559 390 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 BGNP21810 368 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 PNPLA4P41247 253 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 AQP5P55064 265 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 SLC6A3Q01959 620 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 POU5F1BQ06416 359 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 TREML2Q5T2D2 321 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 CAPRIN2Q6IMN6 1127 aaKnown RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 RHBDF2Q6PJF5 856 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 LCLAT1Q6UWP7 414 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 CRELD2Q6UXH1 353 aaPredicted RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 METTL23Q86XA0 190 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 AFAP1L2Q8N4X5 818 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 C2orf69Q8N8R5 385 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 AGAP11Q8TF27 550 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 PIH1D1Q9NWS0 290 aaKnown RBP5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 SNTG2Q9NY99 539 aa5.84□□□□□ -1.47
SYNCRIP-204ENST00000616122 MYH14Q7Z406 1995 aaKnown RBP5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 ARHGEF37A1IGU5 675 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 CILPO75339 1184 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 ENTPD5O75356 428 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 HOXC6P09630 235 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 FAM200BP0CF97 657 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 SRGAP2BP0DMP2 458 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 GHRHRQ02643 423 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 SEPT6Q14141 434 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 CHI3L2Q15782 390 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 UGP2Q16851 508 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 JADE1Q6IE81 842 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 POTEAQ6S8J7 498 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 C15orf39Q6ZRI6 1047 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 SLC7A14Q8TBB6 771 aa5.84□□□□□ -1.48
SYNCRIP-204ENST00000616122 SGF29Q96ES7 293 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms