RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 C11orf74Q86VG3 221 aa22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 SPRYD3Q8NCJ5 442 aa22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 WBP2Q969T9 261 aa22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 SH3BP1Q9Y3L3 701 aa22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 A0A0A0MRY4 1105 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 A0A1B0GVL5 298 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 PDXKO00764 312 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 P4HA1P13674 534 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 PFKFB1P16118 471 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 GRIA2P42262 883 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 KIR2DL1P43626 348 aaPredicted RBP22■■□□□ 1.11
TRAPPC3-208ENST00000616074 PGFP49763 221 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 NDST1P52848 882 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 GAD2Q05329 585 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 SGSM1Q2NKQ1 1148 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 SPOPLQ6IQ16 392 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 BBS7Q8IWZ6 715 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 PHTF2Q8N3S3 785 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 SLC2A14Q8TDB8 520 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 OTUB2Q96DC9 234 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 LSM14BQ9BX40 385 aaKnown RBP22■■□□□ 1.11
TRAPPC3-208ENST00000616074 COMMD8Q9NX08 183 aa22■■□□□ 1.11
TRAPPC3-208ENST00000616074 TNRC6BQ9UPQ9 1833 aaKnown RBP22■■□□□ 1.11
TRAPPC3-208ENST00000616074 MYO18AQ92614 2054 aaKnown RBP22■■□□□ 1.11
TRAPPC3-208ENST00000616074 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 ALDH1A2O94788 518 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 IRF1P10914 325 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 ASPAP45381 313 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 MAP3K7CLP57077 242 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 HSF5Q4G112 596 aaPredicted RBP21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 C1orf220Q5T0J3 134 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 CEP135Q66GS9 1140 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 SV2AQ7L0J3 742 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 ETFBKMTQ8IXQ9 262 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 CRYBG2Q8N1P7 616 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 NAT16Q8N8M0 369 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 C12orf29Q8N999 325 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 OLIG1Q8TAK6 271 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 TMC2Q8TDI7 906 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 CSNK1G1Q9HCP0 422 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 FAM49BQ9NUQ9 324 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 PLXND1Q9Y4D7 1925 aa21.99■■□□□ 1.11
TRAPPC3-208ENST00000616074 LNP1A1A4G5 178 aa21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 ADAM23O75077 832 aa21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 KRT37O76014 449 aa21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 ASS1P00966 412 aaKnown RBP21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 RPN1P04843 607 aaKnown RBP21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 PMLP29590 882 aa21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 TNFRSF4P43489 277 aa21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 EOGTQ5NDL2 527 aa21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 CYP2U1Q7Z449 544 aa21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 UNC93AQ86WB7 457 aa21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 RLN3Q8WXF3 142 aa21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 TAF4BQ92750 862 aa21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 DUSP9Q99956 384 aaKnown RBP21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 NACA2Q9H009 215 aa21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 POLMQ9NP87 494 aaPredicted RBP21.98■■□□□ 1.11
TRAPPC3-208ENST00000616074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.98■■□□□ 1.112e-12■■■■■ 298.1
TRAPPC3-208ENST00000616074 HOXC11O43248 304 aaPredicted RBP21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 TLR5O60602 858 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 TULP3O75386 442 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 KCNK5O95279 499 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 HLA-DRAP01903 254 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 CMA1P23946 247 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 PIK3CAP42336 1068 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 DHPSP49366 369 aaPredicted RBP21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 BTBD8Q5XKL5 378 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 GPRIN1Q7Z2K8 1008 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 WHAMMQ8TF30 809 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 CHAMP1Q96JM3 812 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 TWNKQ96RR1 684 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 FBXO44Q9H4M3 255 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 SPHK2Q9NRA0 654 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 BCCIPQ9P287 314 aaKnown RBP eCLIP21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 HPSEQ9Y251 543 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 FRMD4BQ9Y2L6 1034 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 ZFHX4Q86UP3 3567 aa21.97■■□□□ 1.11
TRAPPC3-208ENST00000616074 C4orf47A7E2U8 309 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 PATE3B3GLJ2 98 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 IKBKBO14920 756 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 CALUO43852 315 aaPredicted RBP21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 MYL1P05976 194 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 ADORA2BP29275 332 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 P2RY2P41231 377 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 ANO4Q32M45 955 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 TMEM25Q86YD3 366 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 FRMD1Q8N878 549 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 HMGB4Q8WW32 186 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 USP25Q9UHP3 1055 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 ANGPTL2Q9UKU9 493 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 CIZ1Q9ULV3 898 aaPredicted RBP21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 TRAF3IP3Q9Y228 551 aa21.96■■□□□ 1.11
TRAPPC3-208ENST00000616074 TCRBV21S2A2A0A5A6 115 aa21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 TBC1D3BA6NDS4 549 aa21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 KHNYNO15037 678 aaKnown RBP21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 TRIM24O15164 1050 aa21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 GREM1O60565 184 aa21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 TBX18O95935 607 aa21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 PRR29P0C7W0 189 aa21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 FAM200BP0CF97 657 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms