RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 A0A0A6YYK5 440 aaPredicted RBP8.45□□□□□ -1.06
PCDH9-205ENST00000614931 GRID2IPA4D2P6 1211 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 PAPLNO95428 1278 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 CALB1P05937 261 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 LCP1P13796 627 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 PGFP49763 221 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 USP46P62068 366 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 GPC5P78333 572 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 ZXDAP98168 799 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 OGDHQ02218 1023 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 DUSP4Q13115 394 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 MTMR3Q13615 1198 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 RAB33AQ14088 237 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 TCEAL1Q15170 157 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 TAF5Q15542 800 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 DDR2Q16832 855 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 ARHGAP29Q52LW3 1261 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 ATAT1Q5SQI0 421 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 OR6B2Q6IFH4 312 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 OLFML1Q6UWY5 402 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 NYAP1Q6ZVC0 841 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 HFE2Q6ZVN8 426 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 SCN4BQ8IWT1 228 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 C3orf20Q8ND61 904 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 CMASQ8NFW8 434 aaPredicted RBP8.45□□□□□ -1.06
PCDH9-205ENST00000614931 SCAMP5Q8TAC9 235 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 SLC35G2Q8TBE7 412 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 FEZF2Q8TBJ5 459 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 SPPL2BQ8TCT7 592 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 GPR152Q8TDT2 470 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 IPO4Q8TEX9 1081 aaKnown RBP8.45□□□□□ -1.06
PCDH9-205ENST00000614931 CTNNBL1Q8WYA6 563 aaPredicted RBP8.45□□□□□ -1.06
PCDH9-205ENST00000614931 KCTD13Q8WZ19 329 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 C18orf8Q96DM3 657 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 VCPIP1Q96JH7 1222 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 HSFY1Q96LI6 401 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 C8orf48Q96LL4 319 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 NUP85Q9BW27 656 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 OXCT2Q9BYC2 517 aaPredicted RBP8.45□□□□□ -1.06
PCDH9-205ENST00000614931 ULBP1Q9BZM6 244 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 DNAI2Q9GZS0 605 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 MIS12Q9H081 205 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 ABCB6Q9NP58 842 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 METTL5Q9NRN9 209 aaKnown RBP8.45□□□□□ -1.06
PCDH9-205ENST00000614931 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.45□□□□□ -1.06
PCDH9-205ENST00000614931 AFF4Q9UHB7 1163 aaKnown RBP8.45□□□□□ -1.06
PCDH9-205ENST00000614931 NR2E1Q9Y466 385 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 C2CD4DB7Z1M9 353 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 TGM5O43548 720 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 ZNF500O60304 480 aaPredicted RBP8.44□□□□□ -1.06
PCDH9-205ENST00000614931 GRAP2O75791 330 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 MTA2O94776 668 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 GLUD1P00367 558 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 SPATA31D3P0C874 917 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 MYBL1P10243 752 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 MSNP26038 577 aaKnown RBP8.44□□□□□ -1.06
PCDH9-205ENST00000614931 GRIK1P39086 918 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 TKTL1P51854 596 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 SLC5A3P53794 718 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 HADHBP55084 474 aaKnown RBP8.44□□□□□ -1.06
PCDH9-205ENST00000614931 DAOAP59103 153 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 RPL7AP62424 266 aaKnown RBP8.44□□□□□ -1.06
PCDH9-205ENST00000614931 CREMQ03060 361 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 KIF5AQ12840 1032 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 MAMLD1Q13495 774 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 ZNF268Q14587 947 aaPredicted RBP8.44□□□□□ -1.06
PCDH9-205ENST00000614931 MGAT5BQ3V5L5 792 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 RAB6CQ53S08 254 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 LIN9Q5TKA1 542 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 DNAJC24Q6P3W2 148 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 LILRA6Q6PI73 481 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 VSTM1Q6UX27 236 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 TMC5Q6UXY8 1006 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 TRIM67Q6ZTA4 783 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 SPATA31D4Q6ZUB0 917 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 BMP8AQ7Z5Y6 402 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 ZDHHC14Q8IZN3 488 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 SLC35F6Q8N357 371 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 EMC1Q8N766 993 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 LRRC57Q8N9N7 239 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 TPCN2Q8NHX9 752 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 ZNF461Q8TAF7 563 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 ZNF564Q8TBZ8 553 aaPredicted RBP8.44□□□□□ -1.06
PCDH9-205ENST00000614931 GIPC2Q8TF65 315 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 C2orf15Q8WU43 125 aaKnown RBP8.44□□□□□ -1.06
PCDH9-205ENST00000614931 HDAC7Q8WUI4 952 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 TRIM11Q96F44 468 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 MCEEQ96PE7 176 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 NOX5Q96PH1 765 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 WDR24Q96S15 920 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 SEPT5Q99719 369 aaPredicted RBP8.44□□□□□ -1.06
PCDH9-205ENST00000614931 ADAM33Q9BZ11 813 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 UBXN6Q9BZV1 441 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 TSGA10Q9BZW7 698 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 RAB6CQ9H0N0 254 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 LUC7LQ9NQ29 371 aaKnown RBP8.44□□□□□ -1.06
PCDH9-205ENST00000614931 CYLDQ9NQC7 956 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 MAN1C1Q9NR34 630 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 CTTNBP2NLQ9P2B4 639 aa8.44□□□□□ -1.06
PCDH9-205ENST00000614931 DPP7Q9UHL4 492 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms