RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 TCP10LQ8TDR4 215 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 TRIM64CA6NLI5 447 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 HUS1O60921 280 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 UNC45BQ8IWX7 931 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 RNFT2Q96EX2 444 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 A0A1W2PQ72 361 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 CCDC162PA2VCL2 907 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 CD3EAPO15446 510 aaKnown RBP14.19□□□□□ -0.14
CHD1-212ENST00000614616 QARSP47897 775 aaKnown RBP14.19□□□□□ -0.14
CHD1-212ENST00000614616 MCPH1Q8NEM0 835 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 PRRG3Q9BZD7 231 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 ZNF222Q9UK12 451 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 FBXO9Q9UK97 447 aaPredicted RBP14.19□□□□□ -0.14
CHD1-212ENST00000614616 COQ6Q9Y2Z9 468 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 ZNF608Q9ULD9 1512 aaPredicted RBP14.19□□□□□ -0.14
CHD1-212ENST00000614616 DDX3XO00571 662 aaKnown RBP eCLIP14.19□□□□□ -0.141e-8■■□□□ 13.9
CHD1-212ENST00000614616 INPP4BO15327 924 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 A1BGP04217 495 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 STARP49675 285 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 C11orf63Q6NUN7 778 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 EIF3MQ7L2H7 374 aaKnown RBP14.19□□□□□ -0.14
CHD1-212ENST00000614616 AKT3Q9Y243 479 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 AP3M2P53677 418 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 VAC14Q08AM6 782 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 ITGA7Q13683 1181 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 SPIDRQ14159 915 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 ZBTB33Q86T24 672 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 SYTL5Q8TDW5 730 aaPredicted RBP14.19□□□□□ -0.14
CHD1-212ENST00000614616 ASAP3Q8TDY4 903 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 MRPL48Q96GC5 212 aaKnown RBP14.19□□□□□ -0.14
CHD1-212ENST00000614616 SYNPO2Q9UMS6 1093 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 EVPLQ92817 2033 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 XPAP23025 273 aaPredicted RBP14.19□□□□□ -0.14
CHD1-212ENST00000614616 GNL1P36915 607 aaPredicted RBP14.19□□□□□ -0.14
CHD1-212ENST00000614616 SPIRE1Q08AE8 756 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 LRRC74AQ0VAA2 488 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 COBLL1Q53SF7 1204 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 ATG16L2Q8NAA4 619 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 NUDT12Q9BQG2 462 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 PDCD10Q9BUL8 212 aa14.19□□□□□ -0.14
CHD1-212ENST00000614616 PLA2R1Q13018 1463 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 C15orf38-AP3S2A0A0A6YYH1 394 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 SLC26A3P40879 764 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 OTUD3Q5T2D3 398 aaPredicted RBP14.18□□□□□ -0.14
CHD1-212ENST00000614616 ARPINQ7Z6K5 226 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 STX12Q86Y82 276 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 NAT9Q9BTE0 207 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 STN1Q9H668 368 aaKnown RBP14.18□□□□□ -0.14
CHD1-212ENST00000614616 AVENQ9NQS1 362 aaPredicted RBP14.18□□□□□ -0.14
CHD1-212ENST00000614616 STON1Q9Y6Q2 735 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 TNRQ92752 1358 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 PAX3P23760 479 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 FDFT1P37268 417 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 CYP51A1Q16850 503 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 VPS37AQ8NEZ2 397 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 HDAC7Q8WUI4 952 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 STAP1Q9ULZ2 295 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 UGGT1Q9NYU2 1555 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 NCAPD2Q15021 1401 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 C3orf70A6NLC5 250 aaPredicted RBP14.18□□□□□ -0.14
CHD1-212ENST00000614616 ASMTLO95671 621 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 CDK7P50613 346 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 ABCB5Q2M3G0 1257 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 NEK10Q6ZWH5 1172 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 LRRC17Q8N6Y2 441 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 STRBPQ96SI9 672 aaKnown RBP14.18□□□□□ -0.14
CHD1-212ENST00000614616 KIFC1Q9BW19 673 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 SPATA16Q9BXB7 569 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 BTDP43251 543 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 ZNF394Q53GI3 561 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 DGKKQ5KSL6 1271 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 ZNF544Q6NX49 715 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 CCNJLQ8IV13 435 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 KBTBD2Q8IY47 623 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 FBXO36Q8NEA4 188 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 LOC100506127A0A0U1RQW1 187 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 SSNA1O43805 119 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 ALAS1P13196 640 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 C6orf183Q5T699 404 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 MAB21L3Q8N8X9 362 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 USP13Q92995 863 aaPredicted RBP14.18□□□□□ -0.14
CHD1-212ENST00000614616 TRIM62Q9BVG3 475 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 POLR1BQ9H9Y6 1135 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 MLXQ9UH92 298 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 A0A087X0T9 212 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 MGRN1O60291 552 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 FAM228BP0C875 321 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 COPZ1P61923 177 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 ALX1Q15699 326 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 SMAD1Q15797 465 aaKnown RBP14.18□□□□□ -0.14
CHD1-212ENST00000614616 KYAT3Q6YP21 454 aaKnown RBP14.18□□□□□ -0.14
CHD1-212ENST00000614616 THNSL1Q8IYQ7 743 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 MARCH7Q9H992 704 aa14.18□□□□□ -0.14
CHD1-212ENST00000614616 RNF17Q9BXT8 1623 aaKnown RBP14.18□□□□□ -0.14
CHD1-212ENST00000614616 GCP02774 474 aa14.17□□□□□ -0.14
CHD1-212ENST00000614616 CYP2D6P10635 497 aa14.17□□□□□ -0.14
CHD1-212ENST00000614616 LINC00523Q86TU6 105 aa14.17□□□□□ -0.14
CHD1-212ENST00000614616 FAM71DQ8N9W8 422 aa14.17□□□□□ -0.14
CHD1-212ENST00000614616 EPB41L1Q9H4G0 881 aa14.17□□□□□ -0.14
CHD1-212ENST00000614616 GREM2Q9H772 168 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms