RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 PTPN9P43378 593 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 RECQLP46063 649 aaPredicted RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 EIF1AXP47813 144 aaKnown RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 HARS2P49590 506 aaKnown RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 RGS7P49802 495 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 VCPP55072 806 aaKnown RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 ADARP55265 1226 aaKnown RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 POLE2P56282 527 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 ARL4CP56559 192 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 CSNK2BP67870 215 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 NOP14P78316 857 aaKnown RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 FOXO1Q12778 655 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 BFSP1Q12934 665 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 RALGDSQ12967 914 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 CSTF3Q12996 717 aaKnown RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 SLC14A1Q13336 389 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 TRPC3Q13507 836 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 CUL2Q13617 745 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 GIT2Q14161 759 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 PTK2BQ14289 1009 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 ZNF268Q14587 947 aaPredicted RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 MBTPS1Q14703 1052 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 CASP8Q14790 479 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 ODF1Q14990 250 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 HERC3Q15034 1050 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 NPTX1Q15818 432 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 CNPY1Q3B7I2 92 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 ELOA3BQ3SY89 546 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 SLC39A12Q504Y0 691 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 SGO2Q562F6 1265 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 FAM209BQ5JX69 171 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 RPUSD3Q6P087 351 aaKnown RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 CNNM4Q6P4Q7 775 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 C4orf22Q6V702 233 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 RFX8Q6ZV50 586 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 CYP4V2Q6ZWL3 525 aaPredicted RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 USP43Q70EL4 1123 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 PM20D2Q8IYS1 436 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 PHTF2Q8N3S3 785 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 LIX1Q8N485 282 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 PRR18Q8N4B5 295 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 ARL14Q8N4G2 192 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 TTLL6Q8N841 843 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 ELOA3Q8NG57 546 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 CEP70Q8NHQ1 597 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 CFAP61Q8NHU2 1237 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 TEX47Q8TBZ9 253 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 SPPL3Q8TCT6 385 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 GANCQ8TET4 914 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 SLC44A1Q8WWI5 657 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 DDX1Q92499 740 aaKnown RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 RAPGEF5Q92565 580 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 SGF29Q96ES7 293 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 EAF1Q96JC9 268 aaPredicted RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 ZSCAN31Q96LW9 406 aaPredicted RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 TOX2Q96NM4 488 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 DDX50Q9BQ39 737 aaKnown RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 DHRS4Q9BTZ2 278 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 ACPTQ9BZG2 426 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 TTYH3Q9C0H2 523 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 C1orf21Q9H246 121 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 XKR8Q9H6D3 395 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 PDE7BQ9NP56 450 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 ANLNQ9NQW6 1124 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 NMRK1Q9NWW6 199 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 SAMD15Q9P1V8 674 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 IFT80Q9P2H3 777 aaPredicted RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 UBA2Q9UBT2 640 aaPredicted RBP3.17□□□□□ -1.9
CBWD3-209ENST00000614377 FBXO40Q9UH90 709 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 IL19Q9UHD0 177 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 FAM153AQ9UHL3 310 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 TINAGQ9UJW2 476 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 SLC8A2Q9UPR5 921 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 INVSQ9Y283 1065 aa3.17□□□□□ -1.9
CBWD3-209ENST00000614377 CASZ1Q86V15 1759 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 PLEKHH2Q8IVE3 1493 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 NUP160Q12769 1436 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 GOLGA8QA0A0J9YX86 632 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 PVALEFA0A1B0GWK0 134 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 PTPDC1A2A3K4 754 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 TYW5A2RUC4 315 aaKnown RBP3.16□□□□□ -1.9
CBWD3-209ENST00000614377 GOLGA8OA6NCC3 632 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 USP27XA6NNY8 438 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.16□□□□□ -1.9
CBWD3-209ENST00000614377 E7ENQ6 273 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 GOLGA8NF8WBI6 632 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 STMND1H3BQB6 276 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 GRIN3BO60391 1043 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 GLAP06280 429 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 DHRS4L1P0CG22 281 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 PABPC1P11940 636 aaKnown RBP3.16□□□□□ -1.9
CBWD3-209ENST00000614377 MYL4P12829 197 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 RAG1P15918 1043 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 IL11P20809 199 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 KELP23276 732 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 CCND1P24385 295 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 SLC1A1P43005 524 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 CCR10P46092 362 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 OR1G1P47890 313 aa3.16□□□□□ -1.9
CBWD3-209ENST00000614377 CPA2P48052 419 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms