RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 ACOT1Q86TX2 421 aa18.92■□□□□ 0.62
SMN2-213ENST00000614240 CEP57L1Q8IYX8 460 aa18.92■□□□□ 0.62
SMN2-213ENST00000614240 NUSAP1Q9BXS6 441 aaKnown RBP18.92■□□□□ 0.62
SMN2-213ENST00000614240 KRT82Q9NSB4 513 aa18.92■□□□□ 0.62
SMN2-213ENST00000614240 COMMD8Q9NX08 183 aa18.92■□□□□ 0.62
SMN2-213ENST00000614240 ABCA7Q8IZY2 2146 aa18.91■□□□□ 0.62
SMN2-213ENST00000614240 LRRIQ3A6PVS8 624 aaPredicted RBP18.91■□□□□ 0.62
SMN2-213ENST00000614240 TNFRSF10BO14763 440 aa18.91■□□□□ 0.62
SMN2-213ENST00000614240 TUBP50607 506 aa18.91■□□□□ 0.62
SMN2-213ENST00000614240 C10orf76Q5T2E6 689 aa18.91■□□□□ 0.62
SMN2-213ENST00000614240 BBS7Q8IWZ6 715 aa18.91■□□□□ 0.62
SMN2-213ENST00000614240 FRMD1Q8N878 549 aa18.91■□□□□ 0.62
SMN2-213ENST00000614240 ZNF513Q8N8E2 541 aaPredicted RBP18.91■□□□□ 0.62
SMN2-213ENST00000614240 PLEKHO2Q8TD55 490 aa18.91■□□□□ 0.62
SMN2-213ENST00000614240 PARD3BQ8TEW8 1205 aa18.91■□□□□ 0.62
SMN2-213ENST00000614240 ELMO3Q96BJ8 720 aa18.91■□□□□ 0.62
SMN2-213ENST00000614240 ZFRQ96KR1 1074 aaKnown RBP18.91■□□□□ 0.62
SMN2-213ENST00000614240 VRTNQ9H8Y1 702 aa18.91■□□□□ 0.62
SMN2-213ENST00000614240 SPHK2Q9NRA0 654 aa18.91■□□□□ 0.62
SMN2-213ENST00000614240 MYO16Q9Y6X6 1858 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 PTPRDP23468 1912 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 CDX4O14627 284 aaPredicted RBP18.9■□□□□ 0.62
SMN2-213ENST00000614240 ADAM23O75077 832 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 TULP3O75386 442 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 HSP90AA1P07900 732 aaKnown RBP18.9■□□□□ 0.62
SMN2-213ENST00000614240 TRIM21P19474 475 aaKnown RBP18.9■□□□□ 0.62
SMN2-213ENST00000614240 PTGER3P43115 390 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 SGSM1Q2NKQ1 1148 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 SNX30Q5VWJ9 437 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 LYSMD4Q5XG99 296 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 PAQR9Q6ZVX9 377 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 TMEM25Q86YD3 366 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 SYT12Q8IV01 421 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 GRAMD1CQ8IYS0 662 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 KCNV2Q8TDN2 545 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 FBXO44Q9H4M3 255 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 EXOC1Q9NV70 894 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 EVLQ9UI08 416 aaPredicted RBP18.9■□□□□ 0.62
SMN2-213ENST00000614240 PCDHA7Q9UN72 937 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 KIAA1549LQ6ZVL6 1849 aa18.9■□□□□ 0.62
SMN2-213ENST00000614240 HOXC11O43248 304 aaPredicted RBP18.89■□□□□ 0.61
SMN2-213ENST00000614240 C4BPAP04003 597 aaKnown RBP18.89■□□□□ 0.61
SMN2-213ENST00000614240 CFIP05156 583 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 CEACAM1P13688 526 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 CCDC130P13994 396 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 CSRP1P21291 193 aaKnown RBP18.89■□□□□ 0.61
SMN2-213ENST00000614240 DPP6P42658 865 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 MAPK8P45983 427 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 MAP3K7CLP57077 242 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 ORC1Q13415 861 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 MAP7D1Q3KQU3 841 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 SDE2Q6IQ49 451 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 ETFBKMTQ8IXQ9 262 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 FUKQ8N0W3 1084 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 PHTF2Q8N3S3 785 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 SLC2A14Q8TDB8 520 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 SDCBP2Q9H190 292 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 TLR8Q9NR97 1041 aaKnown RBP18.89■□□□□ 0.61
SMN2-213ENST00000614240 FAM49BQ9NUQ9 324 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 IL37Q9NZH6 218 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 MBD1Q9UIS9 605 aaPredicted RBP18.89■□□□□ 0.61
SMN2-213ENST00000614240 THADAQ6YHU6 1953 aa18.89■□□□□ 0.61
SMN2-213ENST00000614240 AP5Z1O43299 807 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 TLR5O60602 858 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 VNN1O95497 513 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 RPN1P04843 607 aaKnown RBP18.88■□□□□ 0.61
SMN2-213ENST00000614240 PROS1P07225 676 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 ZDHHC11BP0C7U3 371 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 ZSCAN22P10073 491 aaPredicted RBP18.88■□□□□ 0.61
SMN2-213ENST00000614240 CHRM1P11229 460 aaPredicted RBP18.88■□□□□ 0.61
SMN2-213ENST00000614240 HOXB2P14652 356 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 ADORA2BP29275 332 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 WASP42768 502 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 NDST1P52848 882 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 GOLGA8FQ08AF8 430 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 GOLGA8DPQ0D2H9 430 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 SPDYCQ5MJ68 293 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 RESP18Q5W5W9 173 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 GRAMD4Q6IC98 578 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 DEFB119Q8N690 84 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 JAKMIP2Q96AA8 810 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 SMOQ99835 787 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 SLC32A1Q9H598 525 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 DNAJC17Q9NVM6 304 aaKnown RBP18.88■□□□□ 0.61
SMN2-213ENST00000614240 SERTAD1Q9UHV2 236 aa18.88■□□□□ 0.61
SMN2-213ENST00000614240 LSM7Q9UK45 103 aaKnown RBP18.88■□□□□ 0.61
SMN2-213ENST00000614240 ATXN2Q99700 1313 aaKnown RBP18.88■□□□□ 0.61
SMN2-213ENST00000614240 NEDD8-MDP1E9PL57 170 aa18.87■□□□□ 0.61
SMN2-213ENST00000614240 BEST1O76090 585 aa18.87■□□□□ 0.61
SMN2-213ENST00000614240 FAM200BP0CF97 657 aa18.87■□□□□ 0.61
SMN2-213ENST00000614240 PDIA4P13667 645 aaKnown RBP18.87■□□□□ 0.61
SMN2-213ENST00000614240 ENGP17813 658 aa18.87■□□□□ 0.61
SMN2-213ENST00000614240 NTSR1P30989 418 aa18.87■□□□□ 0.61
SMN2-213ENST00000614240 ATP5C1P36542 298 aaKnown RBP18.87■□□□□ 0.61
SMN2-213ENST00000614240 ATXN3P54252 364 aaPredicted RBP18.87■□□□□ 0.61
SMN2-213ENST00000614240 DLG4P78352 724 aa18.87■□□□□ 0.61
SMN2-213ENST00000614240 CLDN10P78369 228 aa18.87■□□□□ 0.61
SMN2-213ENST00000614240 RPL6Q02878 288 aaKnown RBP18.87■□□□□ 0.61
SMN2-213ENST00000614240 STK4Q13043 487 aa18.87■□□□□ 0.61
SMN2-213ENST00000614240 CEP135Q66GS9 1140 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms