RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 USP18Q9UMW8 372 aa24.01■■□□□ 1.43
FAM228B-208ENST00000613899 SCML2Q9UQR0 700 aa24.01■■□□□ 1.43
FAM228B-208ENST00000613899 DCHS1Q96JQ0 3298 aa24.01■■□□□ 1.43
FAM228B-208ENST00000613899 PSMA7O14818 248 aa24■■□□□ 1.43
FAM228B-208ENST00000613899 SCAMP3O14828 347 aaKnown RBP24■■□□□ 1.43
FAM228B-208ENST00000613899 LRP3O75074 770 aa24■■□□□ 1.43
FAM228B-208ENST00000613899 PPP1R2P41236 205 aa24■■□□□ 1.43
FAM228B-208ENST00000613899 LMNB2Q03252 620 aa24■■□□□ 1.43
FAM228B-208ENST00000613899 ANKRD40Q6AI12 368 aa24■■□□□ 1.43
FAM228B-208ENST00000613899 ELOA2Q8IYF1 753 aaPredicted RBP24■■□□□ 1.43
FAM228B-208ENST00000613899 ERCC4Q92889 916 aaPredicted RBP24■■□□□ 1.43
FAM228B-208ENST00000613899 JAKMIP2Q96AA8 810 aa24■■□□□ 1.43
FAM228B-208ENST00000613899 SPAG17Q6Q759 2223 aa24■■□□□ 1.43
FAM228B-208ENST00000613899 HHLA1C9JL84 531 aa23.99■■□□□ 1.43
FAM228B-208ENST00000613899 ADH5P11766 374 aa23.99■■□□□ 1.43
FAM228B-208ENST00000613899 ACO1P21399 889 aaKnown RBP23.99■■□□□ 1.43
FAM228B-208ENST00000613899 HOXC13P31276 330 aa23.99■■□□□ 1.43
FAM228B-208ENST00000613899 PXNP49023 591 aaPredicted RBP23.99■■□□□ 1.43
FAM228B-208ENST00000613899 PMS1P54277 932 aaKnown RBP23.99■■□□□ 1.43
FAM228B-208ENST00000613899 DMC1Q14565 340 aa23.99■■□□□ 1.43
FAM228B-208ENST00000613899 PUM1Q14671 1186 aaKnown RBP eCLIP23.99■■□□□ 1.43
FAM228B-208ENST00000613899 ZNF394Q53GI3 561 aa23.99■■□□□ 1.43
FAM228B-208ENST00000613899 GPRIN1Q7Z2K8 1008 aa23.99■■□□□ 1.43
FAM228B-208ENST00000613899 GAB3Q8WWW8 586 aa23.99■■□□□ 1.43
FAM228B-208ENST00000613899 HHIPQ96QV1 700 aa23.99■■□□□ 1.43
FAM228B-208ENST00000613899 CYLDQ9NQC7 956 aa23.99■■□□□ 1.43
FAM228B-208ENST00000613899 CISHQ9NSE2 258 aa23.99■■□□□ 1.43
FAM228B-208ENST00000613899 EML5Q05BV3 1969 aa23.98■■□□□ 1.43
FAM228B-208ENST00000613899 MYOFQ9NZM1 2061 aa23.98■■□□□ 1.43
FAM228B-208ENST00000613899 PRR5-ARHGAP8B1AHC4 643 aa23.98■■□□□ 1.43
FAM228B-208ENST00000613899 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.98■■□□□ 1.43
FAM228B-208ENST00000613899 CYP26A1O43174 497 aa23.98■■□□□ 1.43
FAM228B-208ENST00000613899 RPP40O75818 363 aaKnown RBP23.98■■□□□ 1.43
FAM228B-208ENST00000613899 SDHBP21912 280 aa23.98■■□□□ 1.43
FAM228B-208ENST00000613899 ARHGAP8P85298 464 aa23.98■■□□□ 1.43
FAM228B-208ENST00000613899 GOLGA8FQ08AF8 430 aa23.98■■□□□ 1.43
FAM228B-208ENST00000613899 GOLGA8DPQ0D2H9 430 aa23.98■■□□□ 1.43
FAM228B-208ENST00000613899 PPP1R26Q5T8A7 1209 aaPredicted RBP23.98■■□□□ 1.43
FAM228B-208ENST00000613899 RHBDF2Q6PJF5 856 aa23.98■■□□□ 1.43
FAM228B-208ENST00000613899 DUSP16Q9BY84 665 aa23.98■■□□□ 1.43
FAM228B-208ENST00000613899 ARMCX3Q9UH62 379 aaPredicted RBP23.98■■□□□ 1.43
FAM228B-208ENST00000613899 COQ4Q9Y3A0 265 aa23.98■■□□□ 1.43
FAM228B-208ENST00000613899 TRIM49BA6NDI0 452 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 APBB3O95704 486 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 CCDC192P0DO97 292 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 IRF1P10914 325 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 GAD2Q05329 585 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 SPEM2Q0P670 501 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 CBWD6Q4V339 395 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 CBWD3Q5JTY5 395 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 CBWD5Q5RIA9 395 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 LY6G5CQ5SRR4 150 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 RALGAPA1Q6GYQ0 2036 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 USP33Q8TEY7 942 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 TMEM176AQ96HP8 235 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 DHTKD1Q96HY7 919 aaPredicted RBP23.97■■□□□ 1.43
FAM228B-208ENST00000613899 HEXIM2Q96MH2 286 aaKnown RBP23.97■■□□□ 1.43
FAM228B-208ENST00000613899 PNKPQ96T60 521 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 ARID3AQ99856 593 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 PARD6AQ9NPB6 346 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 DLL3Q9NYJ7 618 aa23.97■■□□□ 1.43
FAM228B-208ENST00000613899 K7EQS6 105 aa23.96■■□□□ 1.43
FAM228B-208ENST00000613899 AXIN1O15169 862 aa23.96■■□□□ 1.43
FAM228B-208ENST00000613899 APODP05090 189 aa23.96■■□□□ 1.43
FAM228B-208ENST00000613899 TGM1P22735 817 aa23.96■■□□□ 1.43
FAM228B-208ENST00000613899 ATP5C1P36542 298 aaKnown RBP23.96■■□□□ 1.43
FAM228B-208ENST00000613899 PGFP49763 221 aa23.96■■□□□ 1.43
FAM228B-208ENST00000613899 PSEN1P49768 467 aa23.96■■□□□ 1.43
FAM228B-208ENST00000613899 KIF11P52732 1056 aa23.96■■□□□ 1.43
FAM228B-208ENST00000613899 SEC13P55735 322 aa23.96■■□□□ 1.43
FAM228B-208ENST00000613899 RSPO4Q2I0M5 234 aaPredicted RBP23.96■■□□□ 1.43
FAM228B-208ENST00000613899 KLHDC10Q6PID8 442 aa23.96■■□□□ 1.43
FAM228B-208ENST00000613899 BBS7Q8IWZ6 715 aa23.96■■□□□ 1.43
FAM228B-208ENST00000613899 FAM160A2Q8N612 972 aaPredicted RBP23.96■■□□□ 1.43
FAM228B-208ENST00000613899 SLC4A11Q8NBS3 891 aa23.96■■□□□ 1.43
FAM228B-208ENST00000613899 SLC35C1Q96A29 364 aa23.96■■□□□ 1.43
FAM228B-208ENST00000613899 METTL14Q9HCE5 456 aaKnown RBP23.96■■□□□ 1.43
FAM228B-208ENST00000613899 LSM7Q9UK45 103 aaKnown RBP23.96■■□□□ 1.43
FAM228B-208ENST00000613899 CACNA1AO00555 2505 aa23.95■■□□□ 1.43
FAM228B-208ENST00000613899 KAT7O95251 611 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 RAD23BP54727 409 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 YWHAEP62258 255 aaKnown RBP23.95■■□□□ 1.42
FAM228B-208ENST00000613899 MRPS21P82921 87 aaKnown RBP23.95■■□□□ 1.42
FAM228B-208ENST00000613899 PREPLQ4J6C6 727 aaPredicted RBP23.95■■□□□ 1.42
FAM228B-208ENST00000613899 C2orf27AQ580R0 203 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 BTBD8Q5XKL5 378 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 CCDC186Q7Z3E2 898 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 CACNA2D4Q7Z3S7 1137 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 TADA2BQ86TJ2 420 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 C12orf40Q86WS4 652 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 CEP63Q96MT8 703 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 SPHK2Q9NRA0 654 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 POLR3BQ9NW08 1133 aaPredicted RBP23.95■■□□□ 1.42
FAM228B-208ENST00000613899 OSER1Q9NX31 292 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 EBF1Q9UH73 591 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 MAN1B1Q9UKM7 699 aa23.95■■□□□ 1.42
FAM228B-208ENST00000613899 A0A1W2PQH9 124 aa23.94■■□□□ 1.42
FAM228B-208ENST00000613899 HOXC11O43248 304 aaPredicted RBP23.94■■□□□ 1.42
FAM228B-208ENST00000613899 TBX18O95935 607 aa23.94■■□□□ 1.42
FAM228B-208ENST00000613899 RARGP13631 454 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms